ENSG00000131470


Homo sapiens

Features
Gene ID: ENSG00000131470
  
Biological name :PSMC3IP
  
Synonyms : PSMC3 interacting protein / PSMC3IP / Q9P2W1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q21.2
Gene start: 42572315
Gene end: 42577831
  
Corresponding Affymetrix probe sets: 205956_x_at (Human Genome U133 Plus 2.0 Array)   213951_s_at (Human Genome U133 Plus 2.0 Array)   231401_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000468188
Ensembl peptide - ENSP00000465409
Ensembl peptide - ENSP00000377384
Ensembl peptide - ENSP00000253789
Ensembl peptide - ENSP00000466381
Ensembl peptide - ENSP00000467952
Ensembl peptide - ENSP00000466031
NCBI entrez gene - 29893     See in Manteia.
OMIM - 608665
RefSeq - NM_016556
RefSeq - NM_001256014
RefSeq - NM_001256015
RefSeq - NM_001256016
RefSeq - NM_013290
RefSeq Peptide - NP_001242943
RefSeq Peptide - NP_057640
RefSeq Peptide - NP_037422
RefSeq Peptide - NP_001242945
RefSeq Peptide - NP_001242944
swissprot - Q9P2W1
swissprot - A0A158RUX1
swissprot - K7EK12
swissprot - K7ELD8
swissprot - K7EQS1
swissprot - K7ERB6
Ensembl - ENSG00000131470
  
Related genetic diseases (OMIM): 614324 - Ovarian dysgenesis 3, 614324
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 psmc3ipENSDARG00000037892Danio rerio
 PSMC3IPENSGALG00000019741Gallus gallus
 O35047ENSMUSG00000019303Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR010776  Homologous-pairing protein 2
 IPR036388  Winged helix-like DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006310 DNA recombination IEA
 biological_processGO:0007131 reciprocal meiotic recombination IEA
 biological_processGO:0051321 meiotic cell cycle IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IMP


Pathways (from Reactome)
Pathway description
Meiotic recombination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000133 Gonadal dysgenesis 
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 HP:0000144 Decreased fertility 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000786 Primary amenorrhea 
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 HP:0000823 Delayed puberty 
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 HP:0000837 Elevated gonadotropins 
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 HP:0000869 Secondary amenorrhea 
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 HP:0000938 Osteopenia "Osteopenia refers to a reduction in bone mineral density (BMD) below normal peak BMD but not low enough to be classified as osteoporosis. According to the WHO, osteopenia is characterized by a value of BMD more than 1 standard deviation below the young adult mean, but less than 2 standard deviations below this value." [HPO:curators]
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 HP:0001166 Arachnodactyly "Abnormally long and slender fingers ("spider fingers")." [HPO:curators]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001939 Metabolism abnormality 
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 HP:0002206 Pulmonary fibrosis 
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 HP:0002225 Sparse pubic hair 
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005625 Osteoporosis of vertebrae "Osteoporosis affecting predominantly the vertebrae." [HPO:curators]
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 HP:0008209 Premature ovarian failure 
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 HP:0008214 Decreased serum estradiol 
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 HP:0008684 Absent/hypoplastic uterus 
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 HP:0010311 Aplasia/Hypoplasia of the breasts "Absence or underdevelopment of the breasts." [HPO:curators]
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 HP:0010464 Streak ovary "A developmental disorder characterized by the progressive loss of primordial germ cells in the developing ovaries of an embryo, leading to hypoplastic ovaries composed of wavy connective tissue with occasional clumps of granulosa cells, and frequenty mesonephric or hilar cells." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000121211 MND1 / Q9BWT6 / meiotic nuclear divisions 1  / complex






 

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