ENSG00000131943


Homo sapiens

Features
Gene ID: ENSG00000131943
  
Biological name :C19orf12
  
Synonyms : C19orf12 / chromosome 19 open reading frame 12 / Q9NSK7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: q12
Gene start: 29698886
Gene end: 29715789
  
Corresponding Affymetrix probe sets: 223983_s_at (Human Genome U133 Plus 2.0 Array)   225863_s_at (Human Genome U133 Plus 2.0 Array)   227704_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000485413
Ensembl peptide - ENSP00000467516
Ensembl peptide - ENSP00000482097
Ensembl peptide - ENSP00000313332
Ensembl peptide - ENSP00000345497
Ensembl peptide - ENSP00000376102
Ensembl peptide - ENSP00000376103
Ensembl peptide - ENSP00000467117
NCBI entrez gene - 83636     See in Manteia.
OMIM - 614297
RefSeq - NM_001256046
RefSeq - NM_001031726
RefSeq - NM_001256047
RefSeq - NM_001282929
RefSeq - NM_001282930
RefSeq - NM_001282931
RefSeq - NM_031448
RefSeq Peptide - NP_001269860
RefSeq Peptide - NP_001269858
RefSeq Peptide - NP_001269859
RefSeq Peptide - NP_113636
RefSeq Peptide - NP_001026896
RefSeq Peptide - NP_001242975
RefSeq Peptide - NP_001242976
swissprot - Q9NSK7
swissprot - K7EPS8
swissprot - F8W6J3
Ensembl - ENSG00000131943
  
Related genetic diseases (OMIM): 614298 - Neurodegeneration with brain iron accumulation 4, 614298
  615043 - ?Spastic paraplegia 43, autosomal recessive, 615043
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-260e23.7ENSDARG00000104856Danio rerio
 si:ch211-260e23.8ENSDARG00000105232Danio rerio
 zgc:101715ENSDARG00000102929Danio rerio
 zgc:112052ENSDARG00000058857Danio rerio
 ENSGALG00000032428Gallus gallus
 ENSGALG00000032626Gallus gallus
 C11H19orf12ENSGALG00000004480Gallus gallus
 Q8WUR0ENSMUSG00000054676Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR033369  Protein C19orf12 homologue


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006914 autophagy IMP
 biological_processGO:0006915 apoptotic process IMP
 biological_processGO:0006979 response to oxidative stress IMP
 biological_processGO:0051560 mitochondrial calcium ion homeostasis IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031966 mitochondrial membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000020 Urinary incontinence "Loss of the ability to control the urinary bladder leading to involuntary urination." [HPO:sdoelken]
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 HP:0000529 Progressive visual loss 
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 HP:0000570 Abnormality of saccadic eye movements "An `abnormality of eye movement` (HP:0000496) characterized by impairment of fast (saccadic) eye movements." [HPO:probinson]
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 HP:0000648 Optic atrophy 
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 HP:0000708 Behavioural/Psychiatric Abnormality 
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 HP:0000712 Emotional lability 
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 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
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 HP:0000726 Dementia 
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 HP:0000750 Impaired language development 
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001258 Spastic paraplegia 
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001268 Mental deterioration 
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 HP:0001272 Cerebellar atrophy 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001300 Parkinsonism 
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001348 Brisk reflexes 
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 HP:0001761 Pes cavus 
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002063 Rigidity 
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 HP:0002064 Spastic gait 
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 HP:0002067 Bradykinesia "Bradykinesia literally means slow movement, and is used clinically to denote a slowness in the execution of movement (in contrast to hypokinesia, which is used to refer to slowness in the initiation of movement)." [HPO:curators]
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 HP:0002093 Respiratory insufficiency 
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 HP:0002172 Postural instability 
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 HP:0002180 Neurodegeneration 
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 HP:0002313 Spastic paraparesis 
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 HP:0002355 Difficulty walking 
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 HP:0002359 Frequent falls 
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 HP:0002362 Shuffling gait 
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 HP:0002366 Lower motor neuron signs 
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 HP:0002378 Hand tremor 
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 HP:0002453 Abnormality of the globus pallidus 
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 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
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 HP:0002495 Impaired vibratory sense "A decrease in the ability to perceive vibration. Clinically, this is usually tested with a tuning fork which vibrates at 128 Hz and is applied to bony prominences such as the malleoli at the ankles or the metacarpal-phalangeal joints. There is a slow decay of vibration from the tuning fork. The degree of vibratory sense loss can be crudely estimated by counting the number of seconds that the examiner can perceive the vibration longer than the patient." [HPO:curators]
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 HP:0002607 Bowel incontinence 
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 HP:0002936 Distal sensory impairment 
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003438 Absent ankle reflexes 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003676 Progressive disorder 
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 HP:0003677 Slow progression 
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 HP:0003691 Scapular winging 
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0003812 Phenotypic variability 
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 HP:0003828 Variable expressivity 
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 HP:0006380 Knee flexion deformities 
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 HP:0006466 Contractures of the ankles 
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 HP:0006801 Hyperactive deep tendon reflexes 
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 HP:0007002 Sensory and motor axonal neuropathy 
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 HP:0007010 Poor fine motor coordination 
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 HP:0007083 Hyperreflexia in knees 
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 HP:0012048 Oromandibular dystonia "A kind of focal dystonia characterized by forceful contractions of the face, jaw, and/or tongue causing difficulty in opening and closing the mouth and often affecting chewing and speech." [HPO:probinson]
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 HP:0012785 Flexion contracture of finger "Chronic loss of joint motion in a finger due to structural changes in non-bony tissue." [HPO:probinson]
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 HP:0045007 Abnormality of the substantia nigra 
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 HP:0100315 Lewy bodies 
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 HP:0100710 Impulsivity 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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