ENSG00000134851


Homo sapiens

Features
Gene ID: ENSG00000134851
  
Biological name :TMEM165
  
Synonyms : Q9HC07 / TMEM165 / transmembrane protein 165
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q12
Gene start: 55395957
Gene end: 55453397
  
Corresponding Affymetrix probe sets: 218095_s_at (Human Genome U133 Plus 2.0 Array)   222515_x_at (Human Genome U133 Plus 2.0 Array)   226825_s_at (Human Genome U133 Plus 2.0 Array)   226827_at (Human Genome U133 Plus 2.0 Array)   230512_x_at (Human Genome U133 Plus 2.0 Array)   230657_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000422639
Ensembl peptide - ENSP00000476621
Ensembl peptide - ENSP00000476531
Ensembl peptide - ENSP00000425449
Ensembl peptide - ENSP00000370736
NCBI entrez gene - 55858     See in Manteia.
OMIM - 614726
RefSeq - NM_018475
RefSeq - XM_011534394
RefSeq - XM_017008412
RefSeq Peptide - NP_060945
swissprot - Q9HC07
swissprot - D6RBL0
swissprot - D6RD79
swissprot - V9GY93
swissprot - V9GYC8
Ensembl - ENSG00000134851
  
Related genetic diseases (OMIM): 614727 - Congenital disorder of glycosylation, type IIk, 614727
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmem165ENSDARG00000034600Danio rerio
 TMEM165ENSGALG00000027886Gallus gallus
 P52875ENSMUSG00000029234Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001727  Gdt1 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006487 protein N-linked glycosylation IMP
 biological_processGO:0006874 cellular calcium ion homeostasis IGI
 biological_processGO:0032472 Golgi calcium ion transport IDA
 biological_processGO:0035751 regulation of lysosomal lumen pH IMP
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0010008 endosome membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031901 early endosome membrane IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 cellular_componentGO:0032588 trans-Golgi network membrane IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
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 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000705 Amelogenesis imperfecta 
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 HP:0000939 Osteoporosis "Osteoporosis is a systemic skeletal disease characterized by low bone density and microarchitectural deterioration of bone tissue with a consequent increase in bone fragility. According to the WHO, osteoporosis is characterized by a value of BMD 2.5 standard deviations or more below the young adult mean." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001388 Joint laxity 
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 HP:0001508 Failure to thrive 
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 HP:0001873 Thrombocytopenia 
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 HP:0001955 Unexplained fevers "Episodes of fever for which no infectious cause can be identified." [HPO:curators]
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002500 Abnormality of the cerebral white matter 
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 HP:0002656 Epiphyseal dysplasia 
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 HP:0002751 Kyphoscoliosis 
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003812 Phenotypic variability 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005484 Microcephaly, postnatal 
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 HP:0011800 Midface retrusion "Posterior positions and/or vertical shortening of the infraorbital and perialar regions, or increased concavity of the face and/or reduced nasolabial angle." [DDD:jclayton-smith]
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 HP:0100252 Diaphyseal dysplasia 
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 HP:0100255 Metaphyseal dysplasia "The presence of dysplastic regions in metaphyseal bones." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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