ENSG00000138650


Homo sapiens

Features
Gene ID: ENSG00000138650
  
Biological name :PCDH10
  
Synonyms : PCDH10 / protocadherin 10 / Q9P2E7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q28.3
Gene start: 133149315
Gene end: 133208606
  
Corresponding Affymetrix probe sets: 1552925_at (Human Genome U133 Plus 2.0 Array)   1556328_at (Human Genome U133 Plus 2.0 Array)   1556329_a_at (Human Genome U133 Plus 2.0 Array)   228635_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000264360
Ensembl peptide - ENSP00000480512
NCBI entrez gene - 57575     See in Manteia.
OMIM - 608286
RefSeq - XM_011532150
RefSeq - NM_020815
RefSeq - NM_032961
RefSeq Peptide - NP_116586
RefSeq Peptide - NP_065866
swissprot - Q9P2E7
swissprot - X5D999
Ensembl - ENSG00000138650
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcdh10aENSDARG00000099729Danio rerio
 Pcdh10ENSMUSG00000049100Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O14917 / PCDH17 / protocadherin 17ENSG0000011894638
PCDH19 / Q8TAB3 / protocadherin 19ENSG0000016519437
O60330 / PCDHGA12 / protocadherin gamma subfamily A, 12ENSG0000025315936
Q9Y5H3 / PCDHGA10 / protocadherin gamma subfamily A, 10ENSG0000025384636
PCDH18 / Q9HCL0 / protocadherin 18ENSG0000018918435
Q9Y5G8 / PCDHGA5 / protocadherin gamma subfamily A, 5ENSG0000025348535
Q9Y5G7 / PCDHGA6 / protocadherin gamma subfamily A, 6ENSG0000025373135
Q9Y5G5 / PCDHGA8 / protocadherin gamma subfamily A, 8ENSG0000025376735
Q9Y5G9 / PCDHGA4 / protocadherin gamma subfamily A, 4ENSG0000026257635
Q9Y5H1 / PCDHGA2 / protocadherin gamma subfamily A, 2ENSG0000008185334
Q9Y5G6 / PCDHGA7 / protocadherin gamma subfamily A, 7ENSG0000025353734
Q9Y5H2 / PCDHGA11 / protocadherin gamma subfamily A, 11ENSG0000025387334
Q9Y5H0 / PCDHGA3 / protocadherin gamma subfamily A, 3ENSG0000025424534
Q9Y5E8 / PCDHB15 / protocadherin beta 15ENSG0000011324833
PCDH8 / O95206 / protocadherin 8ENSG0000013609931
PCDH12 / Q9NPG4 / protocadherin 12ENSG0000011355530


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR030712  Protocadherin-10
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IBA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007267 cell-cell signaling IBA
 biological_processGO:0007399 nervous system development IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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