ENSG00000146242


Homo sapiens

Features
Gene ID: ENSG00000146242
  
Biological name :TPBG
  
Synonyms : Q13641 / TPBG / trophoblast glycoprotein
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: q14.1
Gene start: 82363206
Gene end: 82370828
  
Corresponding Affymetrix probe sets: 203476_at (Human Genome U133 Plus 2.0 Array)   239903_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000358765
Ensembl peptide - ENSP00000440049
Ensembl peptide - ENSP00000441219
NCBI entrez gene - 7162     See in Manteia.
OMIM - 190920
RefSeq - XM_011536097
RefSeq - NM_001166392
RefSeq - NM_006670
RefSeq Peptide - NP_006661
RefSeq Peptide - NP_001159864
swissprot - Q13641
Ensembl - ENSG00000146242
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tpbgbENSDARG00000037186Danio rerio
 TPBGENSGALG00000027355Gallus gallus
 TpbgENSMUSG00000035274Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TPBGL / P0DKB5 / trophoblast glycoprotein likeENSG0000026159434


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion NAS
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0009986 cell surface HDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr