ENSG00000158555


Homo sapiens

Features
Gene ID: ENSG00000158555
  
Biological name :GDPD5
  
Synonyms : GDPD5 / glycerophosphodiester phosphodiesterase domain containing 5 / Q8WTR4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q13.5
Gene start: 75434640
Gene end: 75525903
  
Corresponding Affymetrix probe sets: 213343_s_at (Human Genome U133 Plus 2.0 Array)   32502_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000437049
Ensembl peptide - ENSP00000435728
Ensembl peptide - ENSP00000437123
Ensembl peptide - ENSP00000337972
Ensembl peptide - ENSP00000396535
Ensembl peptide - ENSP00000433214
Ensembl peptide - ENSP00000433727
Ensembl peptide - ENSP00000434050
Ensembl peptide - ENSP00000435196
NCBI entrez gene - 81544     See in Manteia.
OMIM - 609632
RefSeq - XM_011545287
RefSeq - XM_011545277
RefSeq - XM_011545278
RefSeq - XM_011545279
RefSeq - XM_011545280
RefSeq - XM_011545281
RefSeq - XM_011545285
RefSeq - XM_011545286
RefSeq - NM_001351167
RefSeq - NM_030792
RefSeq - XM_006718697
RefSeq - XM_011545276
RefSeq Peptide - NP_001338096
RefSeq Peptide - NP_001338097
RefSeq Peptide - NP_110419
swissprot - H0YEF5
swissprot - Q8NDN3
swissprot - Q8WTR4
swissprot - E9PJU5
Ensembl - ENSG00000158555
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gdpd5aENSDARG00000077284Danio rerio
 gdpd5bENSDARG00000076962Danio rerio
 GDPD5ENSGALG00000034967Gallus gallus
 Gdpd5ENSMUSG00000035314Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GDPD2 / Q9HCC8 / glycerophosphodiester phosphodiesterase domain containing 2ENSG0000013005537
GDPD4 / Q6W3E5 / glycerophosphodiester phosphodiesterase domain containing 4ENSG0000017879533


Protein motifs (from Interpro)
Interpro ID Name
 IPR004129  Glycerophosphoryl diester phosphodiesterase
 IPR017946  PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
 IPR030395  Glycerophosphodiester phosphodiesterase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0021522 spinal cord motor neuron differentiation IEA
 biological_processGO:0021895 cerebral cortex neuron differentiation IEA
 biological_processGO:0031175 neuron projection development IEA
 biological_processGO:0045666 positive regulation of neuron differentiation IEA
 biological_processGO:0045746 negative regulation of Notch signaling pathway IEA
 biological_processGO:0045787 positive regulation of cell cycle IEA
 biological_processGO:0048505 regulation of timing of cell differentiation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0012505 endomembrane system IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0030426 growth cone IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:0097038 perinuclear endoplasmic reticulum IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA
 molecular_functionGO:0008889 glycerophosphodiester phosphodiesterase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0047389 glycerophosphocholine phosphodiesterase activity IEA


Pathways (from Reactome)
Pathway description
Glycerophospholipid catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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