ENSG00000164007


Homo sapiens

Features
Gene ID: ENSG00000164007
  
Biological name :CLDN19
  
Synonyms : claudin 19 / CLDN19 / Q8N6F1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p34.2
Gene start: 42733093
Gene end: 42740254
  
Corresponding Affymetrix probe sets: 1552535_at (Human Genome U133 Plus 2.0 Array)   1554804_a_at (Human Genome U133 Plus 2.0 Array)   1554805_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000296387
Ensembl peptide - ENSP00000361617
Ensembl peptide - ENSP00000443229
NCBI entrez gene - 149461     See in Manteia.
OMIM - 610036
RefSeq - NM_001185117
RefSeq - NM_001123395
RefSeq - NM_148960
RefSeq Peptide - NP_001116867
RefSeq Peptide - NP_001172046
RefSeq Peptide - NP_683763
swissprot - Q8N6F1
Ensembl - ENSG00000164007
  
Related genetic diseases (OMIM): 248190 - Hypomagnesemia 5, renal, with ocular involvement, 248190
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cldn19ENSDARG00000044569Danio rerio
 CLDN19ENSGALG00000023580Gallus gallus
 Cldn19ENSMUSG00000066058Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLDN1 / O95832 / claudin 1ENSG0000016334753
CLDN7 / O95471 / claudin 7ENSG0000018188550
CLDN3 / O15551 / claudin 3ENSG0000016521542
CLDN9 / O95484 / claudin 9ENSG0000021393742
CLDN14 / O95500 / claudin 14ENSG0000015926141
CLDN5 / O00501 / claudin 5ENSG0000018411340
CLDN4 / O14493 / claudin 4ENSG0000018914340
CLDN2 / P57739 / claudin 2ENSG0000016537638
CLDN6 / P56747 / claudin 6ENSG0000018469738
CLDN8 / P56748 / claudin 8ENSG0000015628433


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR006187  Claudin
 IPR017974  Claudin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0016338 calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules ISS
 biological_processGO:0019227 neuronal action potential propagation IEA
 biological_processGO:0043297 apical junction assembly IEA
 biological_processGO:0050896 response to stimulus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016323 basolateral plasma membrane IDA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0043296 apical junction complex IDA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0042802 identical protein binding ISS


Pathways (from Reactome)
Pathway description
Tight junction interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000010 Recurrent urinary tract infections "Repeated infections of the urinary tract." [HPO:curators]
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 HP:0000023 Inguinal hernia 
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 HP:0000112 Nephropathy "A nonspecific term referring to disease or damage of the kidneys." [HPO:curators]
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 HP:0000121 Nephrocalcinosis 
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 HP:0000545 Myopia 
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 HP:0000547 Tapetoretinal degeneration 
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 HP:0000567 Chorioretinal coloboma 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000787 Kidney stones 
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 HP:0000790 Hematuria "The presence of blood in the urine. Hematuria may be gross hematuria (visible to the naked eye) or microscopic hematuria (detected by dipstick or microscopic examination of the urine)." [HPO:curators]
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 HP:0001116 Macular coloboma 
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 HP:0001537 Umbilical hernia "Protrusion of abdominal contents through a defect in the abdominal wall musculature around the umbilicus. Skin and subcutaneous tissue overlie the defect." [HPO:curators]
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 HP:0002150 Hypercalciuria 
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 HP:0002917 Hypomagnesemia 
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 HP:0005567 Renal magnesium wasting 
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 HP:0007703 Abnormal retinal pigmentation 
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 HP:0012608 Hypermagnesiuria "An increased concentration of magnesium the `urine` (FMA:12274)." [Eurenomics:fschaefer]
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 HP:0012622 Chronic kidney disease "Functional anomaly of the kidney persisting for at least three months." [Eurenomics:ewuehl]
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 HP:0012637 Renal calcium wasting "High urine calcium in the presence of hypocalcemia." [HPO:probinson]
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 HP:0100530 Abnormality of calcium-phosphate metabolism 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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