ENSG00000164764


Homo sapiens

Features
Gene ID: ENSG00000164764
  
Biological name :SBSPON
  
Synonyms : Q8IVN8 / SBSPON / somatomedin B and thrombospondin type 1 domain containing
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: q21.11
Gene start: 73064540
Gene end: 73124088
  
Corresponding Affymetrix probe sets: 214725_at (Human Genome U133 Plus 2.0 Array)   235209_at (Human Genome U133 Plus 2.0 Array)   235210_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000297354
NCBI entrez gene - 157869     See in Manteia.
RefSeq - NM_153225
RefSeq - XM_017013145
RefSeq Peptide - NP_694957
swissprot - Q8IVN8
Ensembl - ENSG00000164764
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SBSPONENSDARG00000110160Danio rerio
 SBSPONENSGALG00000043532Gallus gallus
 Q3UPR9ENSMUSG00000032719Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR001212  Somatomedin B domain
 IPR036024  Somatomedin B-like domain superfamily
 IPR036383  Thrombospondin type-1 (TSP1) repeat superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 biological_processGO:0006955 immune response IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0031012 extracellular matrix IDA
 molecular_functionGO:0005044 scavenger receptor activity IEA
 molecular_functionGO:0030247 polysaccharide binding IEA


Pathways (from Reactome)
Pathway description
Defective B3GALTL causes Peters-plus syndrome (PpS)
O-glycosylation of TSR domain-containing proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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