ENSG00000166558


Homo sapiens

Features
Gene ID: ENSG00000166558
  
Biological name :SLC38A8
  
Synonyms : A6NNN8 / SLC38A8 / solute carrier family 38 member 8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: q23.3
Gene start: 84009667
Gene end: 84042636
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSP00000299709
Ensembl peptide - ENSP00000457737
Ensembl peptide - ENSP00000455085
NCBI entrez gene - 146167     See in Manteia.
OMIM - 615585
RefSeq - NM_001080442
RefSeq - XM_017022946
RefSeq Peptide - NP_001073911
swissprot - H3BUP5
swissprot - H3BP02
swissprot - A6NNN8
Ensembl - ENSG00000166558
  
Related genetic diseases (OMIM): 609218 - Foveal hypoplasia 2, with or without optic nerve misrouting and/or anterior segment dysgenesis, 609218
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc38a8aENSDARG00000009482Danio rerio
 slc38a8bENSDARG00000054196Danio rerio
 SLC38A8ENSGALG00000003302Gallus gallus
 Q5HZH7ENSMUSG00000034224Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9NVC3 / SLC38A7 / solute carrier family 38 member 7ENSG0000010304241


Protein motifs (from Interpro)
Interpro ID Name
 IPR013057  Amino acid transporter, transmembrane domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003333 amino acid transmembrane transport IBA
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006814 sodium ion transport IEA
 biological_processGO:0006865 amino acid transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015171 amino acid transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000505 Impaired vision 
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 HP:0000568 Microphthalmos "A developmental anomaly characterized by abnormal smallness of one or both eyes." [HPO:curators]
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 HP:0000627 Posterior embryotoxon 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0001137 Alternating esotropia 
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 HP:0001492 Axenfeld anomaly 
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 HP:0007663 Decreased central vision 
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 HP:0007750 Foveal hypoplasia 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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