ENSG00000171045


Homo sapiens
snareTSNARE1domaintransportvesiclemembranetargetcoiled-coilhomologysyntaxinn-terminalmybsant-likedna-bindingintracellularproteinfusionvesicle-mediateddockingendomembraneintegralcomponentcomplexbindingsnapreceptoractivity

Features
Gene ID: ENSG00000171045
  
Biological name :TSNARE1
  
Synonyms : Q96NA8 / TSNARE1 / t-SNARE domain containing 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: q24.3
Gene start: 142212080
Gene end: 142403240
  
Corresponding Affymetrix probe sets: 1552799_at (Human Genome U133 Plus 2.0 Array)   228862_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000429679
Ensembl peptide - ENSP00000427770
Ensembl peptide - ENSP00000430789
Ensembl peptide - ENSP00000428763
Ensembl peptide - ENSP00000429626
Ensembl peptide - ENSP00000303437
NCBI entrez gene - 203062     See in Manteia.
RefSeq - XM_017013181
RefSeq - XM_011516922
RefSeq - XM_017013175
RefSeq - XM_017013176
RefSeq - XM_017013177
RefSeq - XM_017013178
RefSeq - XM_017013179
RefSeq - XM_017013180
RefSeq - NM_001291931
RefSeq - NM_145003
RefSeq - XM_011516912
RefSeq - XM_011516913
RefSeq - XM_011516914
RefSeq - XM_011516915
RefSeq - XM_011516916
RefSeq - XM_011516917
RefSeq - XM_011516918
RefSeq - XM_011516919
RefSeq - XM_011516920
RefSeq - XM_011516921
RefSeq Peptide - NP_001278860
RefSeq Peptide - NP_659440
swissprot - E5RHT3
swissprot - E5RI41
swissprot - A0AVG3
swissprot - Q96NA8
swissprot - E5RHW3
Ensembl - ENSG00000171045
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-208k15.1ENSDARG00000088650Danio rerio
 TSNARE1ENSGALG00000037014Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
STX12 / Q86Y82 / syntaxin 12ENSG0000011775816
STX7 / O15400 / syntaxin 7ENSG0000007995015


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR006011  Syntaxin, N-terminal domain
 IPR010989  SNARE
 IPR028002  Myb/SANT-like DNA-binding domain


Gene Ontology (GO)
macromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingmacromolecule localizationmacromolecule localizationestablishment of localizatioestablishment of localizationcellular localizationcellular localizationcellular component organizatcellular component organizationmembrane dockingmembrane docking
protein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein binding
cellmembraneprotein-containing complexcellmembraneprotein-containing complexcellmembraneprotein-containing complexcellmembraneprotein-containing complexcellmembraneprotein-containing complexcellmembraneprotein-containing complexcellmembraneprotein-containing complexcellmembraneprotein-containing complexcellmembraneprotein-containing complexcellmembraneprotein-containing complexcellcellmembranemembraneprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048278 vesicle docking IBA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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