ENSG00000171217


Homo sapiens

Features
Gene ID: ENSG00000171217
  
Biological name :CLDN20
  
Synonyms : claudin 20 / CLDN20 / P56880
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: q25.3
Gene start: 155264013
Gene end: 155276548
  
Corresponding Affymetrix probe sets: 1554812_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000356133
NCBI entrez gene - 49861     See in Manteia.
RefSeq - NM_001001346
RefSeq - XM_011535848
RefSeq Peptide - NP_001001346
swissprot - P56880
swissprot - A0A140VKA2
Ensembl - ENSG00000171217
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLDN20ENSGALG00000027634Gallus gallus
 Cldn20ENSMUSG00000091530Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLDN17 / P56750 / claudin 17ENSG0000015628231
CLDN10 / P78369 / claudin 10ENSG0000013487329
CLDN18 / P56856 / claudin 18ENSG0000006640527
CLDN15 / P56746 / claudin 15ENSG0000010640426
C9JDP6 / CLDN25 / claudin 25ENSG0000022860725
CLDN22 / Q8N7P3 / claudin 22ENSG0000017730024
A6NM45 / CLDN24 / claudin 24ENSG0000018575823


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR006187  Claudin
 IPR017974  Claudin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016338 calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules ISS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0042802 identical protein binding ISS


Pathways (from Reactome)
Pathway description
Tight junction interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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