ENSG00000172468


Homo sapiens

Features
Gene ID: ENSG00000172468
  
Biological name :HSFY1
  
Synonyms : heat shock transcription factor, Y-linked 1 / HSFY1 / Q96LI6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: Y
Strand: 1
Band: q11.222
Gene start: 18546671
Gene end: 18588963
  
Corresponding Affymetrix probe sets: 224007_at (Human Genome U133 Plus 2.0 Array)   224052_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000303599
Ensembl peptide - ENSP00000311166
Ensembl peptide - ENSP00000342302
Ensembl peptide - ENSP00000372307
NCBI entrez gene - 86614     See in Manteia.
OMIM - 400029
RefSeq - XM_005262565
RefSeq - NM_033108
RefSeq - NM_152584
RefSeq Peptide - NP_689797
RefSeq Peptide - NP_149099
swissprot - Q96LI6
Ensembl - ENSG00000172468
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Hsfy2ENSMUSG00000045336Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HSFY2 / Q96LI6 / heat shock transcription factor, Y-linked 2ENSG00000169953100
HSFX1 / Q9UBD0 / heat shock transcription factor family, X-linked 1ENSG0000017111628
HSFX2 / Q9UBD0 / heat shock transcription factor family, X-linked 2ENSG0000026873828
HSFX4 / A0A1B0GTS1 / heat shock transcription factor family, X-linked member 4ENSG0000028346319
HSFX3 / A0A1B0GWH4 / heat shock transcription factor family, X-linked member 3ENSG0000028369719


Protein motifs (from Interpro)
Interpro ID Name
 IPR000232  Heat shock factor (HSF)-type, DNA-binding
 IPR027725  Heat shock transcription factor family
 IPR027730  Heat shock transcription factor, Y-linked
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000027 Azoospermia 
Show

 HP:0001450 Y-linked inheritance "A mode of inheritance that is observed for traits related to a gene encoded on the Y chromosome." [HPO:curators]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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