ENSG00000176476


Homo sapiens
histonecomplexSGF29chromatindna-templatedacetylationproteinadabindingsgftudor-likedomainorganizationregulationhestablishmentlocalizationsaganucleusgcnactivatorsaga-typemethylatedhatsacetylatehistones

Features
Gene ID: ENSG00000176476
  
Biological name :SGF29
  
Synonyms : Q96ES7 / SAGA complex associated factor 29 / SGF29
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: p11.2
Gene start: 28553915
Gene end: 28591790
  
Corresponding Affymetrix probe sets: 221822_at (Human Genome U133 Plus 2.0 Array)   48117_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000316114
Ensembl peptide - ENSP00000454730
Ensembl peptide - ENSP00000455370
NCBI entrez gene - 112869     See in Manteia.
OMIM - 613374
RefSeq - XM_017022894
RefSeq - NM_138414
RefSeq Peptide - NP_612423
swissprot - H3BN84
swissprot - Q96ES7
swissprot - H3BPL5
Ensembl - ENSG00000176476
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgf29ENSDARG00000002339Danio rerio
 SGF29ENSGALG00000020590Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AC106782.1ENSG0000025813040
AC133555.3ENSG0000025815040


Protein motifs (from Interpro)
Interpro ID Name
 IPR010750  SGF29 tudor-like domain


Gene Ontology (GO)
cellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationestablishment of localizationcellular localizationcellular componcellular component organizationnitrogen compounitrogen compound metabolic processbiosynthetic prbiosynthetic processcellular metabocellular metabolic processprimary metabolprimary metabolic processorganic substanorganic substance metabolic processmacromolecule lmacromolecule localizationestablishment oestablishment of localizationcellular localicellular localization
protein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein binding
cellprotein-containing complexorganellemembrane-enclosed lumencellprotein-containing complexorganellemembrane-enclosed lumencellprotein-containing complexorganellemembrane-enclosed lumencellprotein-containing complexorganellemembrane-enclosed lumencellprotein-containing complexorganellemembrane-enclosed lumencellprotein-containing complexorganellemembrane-enclosed lumencellprotein-containing complexorganellemembrane-enclosed lumencellprotein-containing complexorganellemembrane-enclosed lumencellprotein-containing complexorganellemembrane-enclosed lumencellprotein-containing complexorganellemembrane-enclosed lumencellcellprotein-containing complexprotein-containing complexorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumen
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0016573 histone acetylation IDA
 biological_processGO:0043966 histone H3 acetylation IDA
 biological_processGO:0071169 establishment of protein localization to chromatin TAS
 cellular_componentGO:0000124 SAGA complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005671 Ada2/Gcn5/Ada3 transcription activator complex IDA
 cellular_componentGO:0070461 SAGA-type complex IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0035064 methylated histone binding IDA


Pathways (from Reactome)
Pathway description
HATs acetylate histones


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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