ENSG00000176542


Homo sapiens

Features
Gene ID: ENSG00000176542
  
Biological name :USF3
  
Synonyms : Q68DE3 / upstream transcription factor family member 3 / USF3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: q13.2
Gene start: 113648385
Gene end: 113696646
  
Corresponding Affymetrix probe sets: 1559601_at (Human Genome U133 Plus 2.0 Array)   227433_at (Human Genome U133 Plus 2.0 Array)   227435_at (Human Genome U133 Plus 2.0 Array)   242508_at (Human Genome U133 Plus 2.0 Array)   242513_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000420752
Ensembl peptide - ENSP00000320794
Ensembl peptide - ENSP00000420721
NCBI entrez gene - 205717     See in Manteia.
OMIM - 617568
RefSeq - XM_017005872
RefSeq - NM_001009899
RefSeq - XM_005247208
RefSeq - XM_017005871
RefSeq Peptide - NP_001009899
swissprot - C9JBW0
swissprot - Q68DE3
Ensembl - ENSG00000176542
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usf3ENSDARG00000077431Danio rerio
 USF3ENSGALG00000031560Gallus gallus
 Usf3ENSMUSG00000068284Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR036638  Helix-loop-helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006491 N-glycan processing IBA
 biological_processGO:0010719 negative regulation of epithelial to mesenchymal transition IMP
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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