ENSG00000178229


Homo sapiens

Features
Gene ID: ENSG00000178229
  
Biological name :ZNF543
  
Synonyms : Q08ER8 / zinc finger protein 543 / ZNF543
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: q13.43
Gene start: 57320509
Gene end: 57330776
  
Corresponding Affymetrix probe sets: 240191_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000322545
NCBI entrez gene - 125919     See in Manteia.
OMIM - 616847
RefSeq - NM_213598
RefSeq Peptide - NP_998763
swissprot - Q08ER8
Ensembl - ENSG00000178229
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5CZA5 / ZNF805 / zinc finger protein 805ENSG0000020452477
O43296 / ZNF264 / zinc finger protein 264ENSG0000008384464
Q14592 / ZNF460 / zinc finger protein 460ENSG0000019771459
Q96NL3 / ZNF599 / zinc finger protein 599ENSG0000015389654
Q7Z398 / ZNF550 / zinc finger protein 550ENSG0000025136942
ZNF80 / P51504 / zinc finger protein 80ENSG0000017425526


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr