ENSG00000178409


Homo sapiens

Features
Gene ID: ENSG00000178409
  
Biological name :BEND3
  
Synonyms : BEND3 / BEN domain containing 3 / Q5T5X7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: q21
Gene start: 107065182
Gene end: 107115269
  
Corresponding Affymetrix probe sets: 227920_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000358038
Ensembl peptide - ENSP00000411268
NCBI entrez gene - 57673     See in Manteia.
OMIM - 616374
RefSeq - XM_017011138
RefSeq - NM_001080450
RefSeq - XM_005267080
RefSeq - XM_011536005
RefSeq - XM_005267079
RefSeq Peptide - NP_001073919
swissprot - Q5T5X7
Ensembl - ENSG00000178409
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bend3ENSDARG00000076903Danio rerio
 BEND3ENSGALG00000015314Gallus gallus
 Bend3ENSMUSG00000038214Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR018379  BEN domain
 IPR033583  BEN domain-containing protein 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0000183 chromatin silencing at rDNA IMP
 biological_processGO:0006306 DNA methylation IMP
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0034773 histone H4-K20 trimethylation IDA
 biological_processGO:0036124 histone H3-K9 trimethylation IDA
 biological_processGO:0043967 histone H4 acetylation IDA
 biological_processGO:0051260 protein homooligomerization IDA
 biological_processGO:0080182 histone H3-K4 trimethylation IMP
 biological_processGO:0098532 histone H3-K27 trimethylation IDA
 biological_processGO:1903580 positive regulation of ATP metabolic process IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005720 nuclear heterochromatin IDA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0000182 rDNA binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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