ENSG00000180316


Homo sapiens

Features
Gene ID: ENSG00000180316
  
Biological name :PNPLA1
  
Synonyms : patatin like phospholipase domain containing 1 / PNPLA1 / Q8N8W4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: p21.31
Gene start: 36243203
Gene end: 36312229
  
Corresponding Affymetrix probe sets: 1553364_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000490785
Ensembl peptide - ENSP00000321116
Ensembl peptide - ENSP00000373367
Ensembl peptide - ENSP00000378072
Ensembl peptide - ENSP00000391868
NCBI entrez gene - 285848     See in Manteia.
OMIM - 612121
RefSeq - XM_017010779
RefSeq - NM_001145717
RefSeq - NM_173676
RefSeq - XM_011514519
RefSeq - XM_011514520
RefSeq - XM_017010776
RefSeq - XM_017010777
RefSeq - XM_017010778
RefSeq - NM_001145716
RefSeq Peptide - NP_775947
RefSeq Peptide - NP_001139188
RefSeq Peptide - NP_001139189
swissprot - A0A0C4DG24
swissprot - Q8N8W4
swissprot - A0A1B0GW56
swissprot - B8XXQ3
Ensembl - ENSG00000180316
  
Related genetic diseases (OMIM): 615024 - Ichthyosis, congenital, autosomal recessive 10, 615024
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000000477Gallus gallus
 Pnpla1ENSMUSG00000043286Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PNPLA3 / Q9NST1 / patatin like phospholipase domain containing 3ENSG0000010034425
PNPLA2 / Q96AD5 / patatin like phospholipase domain containing 2ENSG0000017766625
PNPLA5 / Q7Z6Z6 / patatin like phospholipase domain containing 5ENSG0000010034123
P41247 / PNPLA4 / patatin like phospholipase domain containing 4ENSG0000000675715


Protein motifs (from Interpro)
Interpro ID Name
 IPR002641  Patatin-like phospholipase domain
 IPR016035  Acyl transferase/acyl hydrolase/lysophospholipase
 IPR033562  Patatin-like phospholipase domain-containing protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0016042 lipid catabolic process IEA
 biological_processGO:0019433 triglyceride catabolic process IBA
 biological_processGO:0055088 lipid homeostasis IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005811 lipid droplet IBA
 cellular_componentGO:0016020 membrane IBA
 molecular_functionGO:0004806 triglyceride lipase activity IBA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000491 Keratitis "Inflammation of the cornea." [HPO:curators]
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 HP:0000656 Ectropion "An abnormal turning outward of the lower eyelid." [HPO:sdoelken]
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 HP:0000966 Hypohidrosis "Abnormally diminished capacity to sweat." [HPO:curators]
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 HP:0000982 Palmoplantar keratoderma 
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 HP:0000989 Pruritus "Pruritus is an itch or a sensation that makes a person want to scratch. This term refers to an abnormally increased disposition to experience pruritus." [HPO:curators]
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 HP:0001019 Erythroderma "An inflammatory exfoliative dermatosis involving nearly all of the surface of the skin. Erythroderma develops suddenly. A patchy erythema may generalize and spread to affect most of the skin. Scaling may appear in 2-6 days and be accompanied by hot, red, dry skin, malaise, and fever." [HPO:probinson]
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 HP:0001508 Failure to thrive 
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0001597 Abnormality of the nails "Abnormality of the fingernails or toenails." [HPO:curators]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0007431 Congenital ichthyosiform erythroderma 
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 HP:0008064 Ichthyosiform abnormality of the skin 
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 HP:0025114 Hypergranulosis "Hypergranulosis is an increased thickness of the stratum granulosum." []
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 HP:0200020 Corneal erosions "Erosions or Abbrasions of the cornea s outermost layer of epithelial cells." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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