ENSG00000188620


Homo sapiens
transcriptiondevelopmentdnabindingHMX3homeoboxdomainrnapolymeraseiisequence-specificdna-templatedregulationearprocesshomeobox-likesuperfamilyconservedsitemetazoamulticellularorganismnervousbrainembryoimplantationcelldifferentiationinnermorphogenesisneuromuscular

Features
Gene ID: ENSG00000188620
  
Biological name :HMX3
  
Synonyms : A6NHT5 / H6 family homeobox 3 / HMX3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: 1
Band: q26.13
Gene start: 123135962
Gene end: 123137741
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSP00000350549
NCBI entrez gene - 340784     See in Manteia.
OMIM - 613380
RefSeq - NM_001105574
RefSeq Peptide - NP_001099044
swissprot - A6NHT5
Ensembl - ENSG00000188620
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hmx3aENSDARG00000070955Danio rerio
 HMX3ENSGALG00000023415Gallus gallus
 Hmx3ENSMUSG00000040148Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HMX1 / Q9NP08 / H6 family homeobox 1ENSG0000021561240
HMX2 / A2RU54 / H6 family homeobox 2ENSG0000018881632
NKX3-2 / P78367 / NK3 homeobox 2ENSG0000010970526
NKX2-3 / Q8TAU0 / NK2 homeobox 3ENSG0000011991920
A6NCS4 / NKX2-6 / NK2 homeobox 6ENSG0000018005319
NKX2-4 / Q9H2Z4 / NK2 homeobox 4ENSG0000012581618
NKX2-5 / P52952 / NK2 homeobox 5ENSG0000018307218
NKX2-1 / P43699 / NK2 homeobox 1ENSG0000013635217
NKX3-1 / Q99801 / NK3 homeobox 1ENSG0000016703417
NKX2-2 / O95096 / NK2 homeobox 2ENSG0000012582015
NKX2-8 / O15522 / NK2 homeobox 8ENSG0000013632715


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulti-multicellular organism processcellular developmental processsystem processmulticellular organism reproductionnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulti-multicellular organism processcellular developmental processsystem processmulticellular organism reproductionnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulti-multicellular organism processcellular developmental processsystem processmulticellular organism reproductionnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulti-multicellular organism processcellular developmental processsystem processmulticellular organism reproductionnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulti-multicellular organism processcellular developmental processsystem processmulticellular organism reproductionnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulti-multicellular organism processcellular developmental processsystem processmulticellular organism reproductionnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulti-multicellular organism processcellular developmental processsystem processmulticellular organism reproductionnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulti-multicellular organism processcellular developmental processsystem processmulticellular organism reproductionnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulti-multicellular organism processcellular developmental processsystem processmulticellular organism reproductionnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulti-multicellular organism processcellular developmental processsystem processmulticellular organism reproductionnitrogen componitrogen compound metabolic processbiosynthetic pbiosynthetic processcellular metabcellular metabolic processprimary metaboprimary metabolic processorganic substaorganic substance metabolic processanatomical stranatomical structure developmentmulti-multicelmulti-multicellular organism processcellular develcellular developmental processsystem processsystem processmulticellular multicellular organism reproduction
organic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityDNA-binding transcription factor activity
cellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellcellorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007420 brain development IEA
 biological_processGO:0007566 embryo implantation IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0042472 inner ear morphogenesis IEA
 biological_processGO:0043583 ear development IEA
 biological_processGO:0050885 neuromuscular process controlling balance IEA
 biological_processGO:0060135 maternal process involved in female pregnancy IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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