ENSG00000204532


Homo sapiens

Features
Gene ID: ENSG00000204532
  
Biological name :ZSCAN5C
  
Synonyms : A6NGD5 / zinc finger and SCAN domain containing 5C / ZSCAN5C
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: q13.43
Gene start: 56202301
Gene end: 56209452
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSP00000365443
Ensembl peptide - ENSP00000435234
NCBI entrez gene - 649137     See in Manteia.
RefSeq - NM_001358413
RefSeq Peptide - NP_001345342
swissprot - A6NGD5
Ensembl - ENSG00000204532
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Zscan5bENSMUSG00000058028Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9BUG6 / ZSCAN5A / zinc finger and SCAN domain containing 5AENSG0000013184884
A6NJL1 / ZSCAN5B / zinc finger and SCAN domain containing 5BENSG0000019721376


Protein motifs (from Interpro)
Interpro ID Name
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr