ENSG00000206538


Homo sapiens
VGLL3dna-templatedregulationrnapolymeraseiitdurepeatvestigialfamiliynucleusfactoractivitydistalenhancersequence-specificbinding

Features
Gene ID: ENSG00000206538
  
Biological name :VGLL3
  
Synonyms : A8MV65 / vestigial like family member 3 / VGLL3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: p12.1
Gene start: 86876388
Gene end: 86991119
  
Corresponding Affymetrix probe sets: 220327_at (Human Genome U133 Plus 2.0 Array)   227399_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000419115
Ensembl peptide - ENSP00000489678
Ensembl peptide - ENSP00000373199
Ensembl peptide - ENSP00000381436
NCBI entrez gene - 389136     See in Manteia.
OMIM - 609980
RefSeq - XM_006713138
RefSeq - NM_001320493
RefSeq - NM_001320494
RefSeq - NM_016206
RefSeq Peptide - NP_057290
RefSeq Peptide - NP_001307422
RefSeq Peptide - NP_001307423
swissprot - A0A1B0GTF5
swissprot - A8MV65
swissprot - H7C571
Ensembl - ENSG00000206538
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vgll3ENSDARG00000038305Danio rerio
 VGLL3ENSGALG00000015497Gallus gallus
 Vgll3ENSMUSG00000091243Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
VGLL2 / Q8N8G2 / vestigial like family member 2ENSG0000017016233


Protein motifs (from Interpro)
Interpro ID Name
 IPR006627  TDU repeat
 IPR011520  Vestigial familiy


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic nitrogen compound metabolic processbiosynthetic processbiosynthetic processcellular metabolic processcellular metabolic processprimary metabolic processprimary metabolic processorganic substance metabolic organic substance metabolic process
DNA-binding transcription factor activityDNA-binding transcription factor activityDNA-binding transcription factor activityDNA-binding transcription factor activityDNA-binding transcription factor activityDNA-binding transcription factor activityDNA-binding transcription factor activityDNA-binding transcription factor activityDNA-binding transcription factor activityDNA-binding transcription factor activityDNA-binding transcription factor activityDNA-binding transcription factor activity
cellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellcellorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003705 transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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