ENSG00000256977


Homo sapiens

Features
Gene ID: ENSG00000256977
  
Biological name :LIMS3
  
Synonyms : LIMS3 / LIM zinc finger domain containing 3 / P0CW19
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q13
Gene start: 109898428
Gene end: 109924868
  
Corresponding Affymetrix probe sets: 212687_at (Human Genome U133 Plus 2.0 Array)   223800_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000488227
Ensembl peptide - ENSP00000488782
Ensembl peptide - ENSP00000488486
Ensembl peptide - ENSP00000405165
NCBI entrez gene - 96626     See in Manteia.
RefSeq - NM_033514
RefSeq Peptide - NP_277049
swissprot - A0A0J9YYC1
swissprot - A0A0J9YXC7
swissprot - P0CW19
Ensembl - ENSG00000256977
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lims1ENSDARG00000026985Danio rerio
 lims2ENSDARG00000014976Danio rerio
 Lims1ENSMUSG00000019920Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LIMS4 / P0CW20 / LIM zinc finger domain containing 4ENSG00000256671100
AC112229.3ENSG0000025720799
AC013271.1ENSG0000028433799
LIMS1 / P48059 / LIM zinc finger domain containing 1ENSG0000016975697
LIMS2 / Q7Z4I7 / LIM zinc finger domain containing 2ENSG0000007216340
LDB3 / O75112 / LIM domain binding 3ENSG0000012236710
PDLIM5 / Q96HC4 / PDZ and LIM domain 5ENSG0000016311010
PDLIM7 / Q9NR12 / PDZ and LIM domain 7ENSG000001969239
FHL1 / Q13642 / four and a half LIM domains 1ENSG000000222676
FHL2 / Q14192 / four and a half LIM domains 2ENSG000001156414
PXN / P49023 / paxillinENSG000000891593
FHL5 / Q5TD97 / four and a half LIM domains 5ENSG000001122143
O43294 / TGFB1I1 / transforming growth factor beta 1 induced transcript 1ENSG000001406823
FHL3 / Q13643 / four and a half LIM domains 3ENSG000001833863
LPXN / O60711 / leupaxinENSG000001100312


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR017351  LIM and senescent cell antigen-like-containing domain protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045216 cell-cell junction organization IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005925 focal adhesion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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