ENSGALG00000000558


Gallus gallus

Features
Gene ID: ENSGALG00000000558
  
Biological name :SLC1A6
  
Synonyms : SLC1A6 / solute carrier family 1 member 6
  
Possible biological names infered from orthology : O35544 / P48664 / solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6
  
Species: Gallus gallus
  
Chr. number: 28
Strand: -1
Band:
Gene start: 682646
Gene end: 704983
  
Corresponding Affymetrix probe sets: Gga.12936.1.S1_at (Chicken Array)   Gga.14445.1.S1_s_at (Chicken Array)   GgaAffx.26346.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000000775
NCBI entrez gene - 420057     See in Manteia.
RefSeq - XM_004948655
swissprot - E1C8G2
Ensembl - ENSGALG00000000558
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc1a6ENSDARG00000010096Danio rerio
 P48664ENSG00000105143Homo sapiens
 O35544ENSMUSG00000005357Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SLC1A3 / solute carrier family 1 member 3 / P43003* / P56564* / solute carrier family 1 (glial high affinity glutamate transporter), member 3*ENSGALG0000000358268
SLC1A1 / solute carrier family 1 member 1 / P43005* / P51906* / solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1*ENSGALG0000001018750
SLC1A7 / solute carrier family 1 member 7 / O00341* / solute carrier family 1 (glutamate transporter), member 7*ENSGALG0000001067348
ENSGALG0000000072247
SLC1A2 / solute carrier family 1 member 2 / P43004* / P43006* / solute carrier family 1 (glial high affinity glutamate transporter), member 2*ENSGALG0000003755647
SLC1A4 / solute carrier family 1 member 4 / O35874* / P43007* / solute carrier family 1 (glutamate/neutral amino acid transporter), member 4*ENSGALG0000000881140


Protein motifs (from Interpro)
Interpro ID Name
 IPR001991  Sodium:dicarboxylate symporter
 IPR018107  Sodium:dicarboxylate symporter, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015813 L-glutamate transmembrane transport IEA
 biological_processGO:0042391 regulation of membrane potential IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045111 intermediate filament cytoskeleton IEA
 molecular_functionGO:0005313 L-glutamate transmembrane transporter activity IEA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
Glutamate Neurotransmitter Release Cycle
Transport of inorganic cations/anions and amino acids/oligopeptides


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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