ENSGALG00000001475


Gallus gallus
microtubuleSTMN1stathminregulationneuronprojectioncytoskeletonbindingfamilyconservedsitepolymerizationdevelopmentorganizationcytoplasmproteintubulin

Features
Gene ID: ENSGALG00000001475
  
Biological name :STMN1
  
Synonyms : P31395 / Stathmin / STMN1
  
Possible biological names infered from orthology : P16949 / P54227 / stathmin 1
  
Species: Gallus gallus
  
Chr. number: 23
Strand: 1
Band:
Gene start: 3242123
Gene end: 3252831
  
Corresponding Affymetrix probe sets: Gga.2844.2.S1_s_at (Chicken Array)   GgaAffx.21767.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058924
Ensembl peptide - ENSGALP00000063732
Ensembl peptide - ENSGALP00000060878
Ensembl peptide - ENSGALP00000002235
Ensembl peptide - ENSGALP00000048802
Ensembl peptide - ENSGALP00000050128
Ensembl peptide - ENSGALP00000050542
NCBI entrez gene - 396057     See in Manteia.
RefSeq - XM_015297604
RefSeq - XM_015297605
RefSeq - XM_015297606
RefSeq - NM_001001858
RefSeq - XM_015297603
RefSeq Peptide - NP_001001858
swissprot - P31395
swissprot - A0A1L1RJK1
swissprot - A0A1L1RQ04
Ensembl - ENSGALG00000001475
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stmn1aENSDARG00000004169Danio rerio
 stmn1bENSDARG00000033655Danio rerio
 STMN1ENSG00000117632Homo sapiens
 Stmn1ENSMUSG00000028832Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
STMN4 / stathmin 4 / P63042* / Q9H169* / stathmin-like 4*ENSGALG0000003092964
STMN2 / Q90987 / Stathmin-2 / Q93045* / P55821* / stathmin-like 2*ENSGALG0000003969061
STMN3 / O93388 / Stathmin-3 / Q9NZ72* / O70166* / stathmin-like 3*ENSGALG0000000613059


Protein motifs (from Interpro)
Interpro ID Name
 IPR000956  Stathmin family
 IPR030514  Stathmin, conserved site


Gene Ontology (GO)
cellular component organizationmicrotubule-based processanatomical structure developmentcellular developmental processcellular component organizationmicrotubule-based processanatomical structure developmentcellular developmental processcellular component organizationmicrotubule-based processanatomical structure developmentcellular developmental processcellular component organizationmicrotubule-based processanatomical structure developmentcellular developmental processcellular component organizationmicrotubule-based processanatomical structure developmentcellular developmental processcellular component organizationmicrotubule-based processanatomical structure developmentcellular developmental processcellular component organizationmicrotubule-based processanatomical structure developmentcellular developmental processcellular component organizationmicrotubule-based processanatomical structure developmentcellular developmental processcellular component organizationmicrotubule-based processanatomical structure developmentcellular developmental processcellular component organizationmicrotubule-based processanatomical structure developmentcellular developmental processcellular component organizationcellular component organizationmicrotubule-based processmicrotubule-based processanatomical structure developmentanatomical structure developmentcellular developmental processcellular developmental process
protein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein binding
cellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellcellorganelleorganellesupramolecular complexsupramolecular complex
TypeGO IDTermEv.Code
 biological_processGO:0007019 microtubule depolymerization IBA
 biological_processGO:0031110 regulation of microtubule polymerization or depolymerization IEA
 biological_processGO:0031175 neuron projection development IBA
 biological_processGO:0051493 regulation of cytoskeleton organization IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0043005 neuron projection IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0015631 tubulin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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