ENSGALG00000001621


Gallus gallus

Features
Gene ID: ENSGALG00000001621
  
Biological name :CLDN5
  
Synonyms : claudin-5 / CLDN5
  
Possible biological names infered from orthology : O00501 / O54942
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 701150
Gene end: 702907
  
Corresponding Affymetrix probe sets: Gga.3111.1.S1_at (Chicken Array)   Gga.3111.1.S2_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000002474
NCBI entrez gene - 374028     See in Manteia.
RefSeq - NM_204201
RefSeq Peptide - NP_989532
swissprot - A0A1D6UPQ4
Ensembl - ENSGALG00000001621
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cldn5aENSDARG00000043716Danio rerio
 cldn5bENSDARG00000014059Danio rerio
 CLDN5ENSG00000184113Homo sapiens
 Cldn5ENSMUSG00000041378Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLDN3 / claudin 3 / O15551* / Q9Z0G9*ENSGALG0000002255755
ENSGALG0000003513149
CLDN8* / P56748* / Q9Z260* / claudin 8*ENSGALG0000001584144
CLDN1 / claudin 1 / O88551* / O95832*ENSGALG0000002686244
CLDN14 / claudin 14 / O95500* / Q9Z0S3*ENSGALG0000001604340
CLDN8* / P56748* / Q9Z260* / claudin 8*ENSGALG0000004407339
CLDN19 / claudin 19 / Q8N6F1* / Q9ET38*ENSGALG0000002358038
CLDN2 / claudin 2 / O88552* / P57739*ENSGALG0000000731134


Protein motifs (from Interpro)
Interpro ID Name
 IPR003551  Claudin-5
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR006187  Claudin
 IPR017974  Claudin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr