ENSGALG00000001850


Gallus gallus

Features
Gene ID: ENSGALG00000001850
  
Biological name :RARS
  
Synonyms : arginine--tRNA ligase, cytoplasmic / RARS
  
Possible biological names infered from orthology : arginyl-tRNA synthetase / P54136 / Q9D0I9
  
Species: Gallus gallus
  
Chr. number: 13
Strand: -1
Band:
Gene start: 4736838
Gene end: 4753670
  
Corresponding Affymetrix probe sets: Gga.17202.1.S1_s_at (Chicken Array)   GgaAffx.11676.1.S1_at (Chicken Array)   GgaAffx.1215.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053061
Ensembl peptide - ENSGALP00000059409
Ensembl peptide - ENSGALP00000058684
Ensembl peptide - ENSGALP00000002862
NCBI entrez gene - 416168     See in Manteia.
RefSeq - NM_001030607
RefSeq Peptide - NP_001025778
swissprot - A0A1L1RIW0
swissprot - A0A1D5PJR5
swissprot - F1NFP5
Ensembl - ENSGALG00000001850
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rarsENSDARG00000054530Danio rerio
 RARSENSG00000113643Homo sapiens
 RarsENSMUSG00000018848Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RARS2 / arginyl-tRNA synthetase 2, mitochondrial / Q3U186* / Q5T160* / Probable arginine--tRNA ligase, mitochondrial *ENSGALG0000001580625


Protein motifs (from Interpro)
Interpro ID Name
 IPR001278  Arginine-tRNA ligase
 IPR001412  Aminoacyl-tRNA synthetase, class I, conserved site
 IPR005148  Arginyl tRNA synthetase N-terminal domain
 IPR008909  DALR anticodon binding
 IPR009080  Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006420 arginyl-tRNA aminoacylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0017101 aminoacyl-tRNA synthetase multienzyme complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004814 arginine-tRNA ligase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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