ENSGALG00000002144


Gallus gallus

Features
Gene ID: ENSGALG00000002144
  
Biological name :THRAP3
  
Synonyms : THRAP3 / thyroid hormone receptor associated protein 3
  
Possible biological names infered from orthology : Q569Z6 / Q9Y2W1
  
Species: Gallus gallus
  
Chr. number: 23
Strand: -1
Band:
Gene start: 4072417
Gene end: 4093864
  
Corresponding Affymetrix probe sets: Gga.3068.1.S1_at (Chicken Array)   Gga.3068.2.S1_at (Chicken Array)   Gga.3068.2.S1_s_at (Chicken Array)   Gga.3068.3.S1_at (Chicken Array)   GgaAffx.11483.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049139
Ensembl peptide - ENSGALP00000064385
Ensembl peptide - ENSGALP00000058804
Ensembl peptide - ENSGALP00000054395
Ensembl peptide - ENSGALP00000003357
NCBI entrez gene - 419623     See in Manteia.
RefSeq - XM_015297659
RefSeq - NM_001305665
RefSeq - XM_015297658
RefSeq Peptide - NP_001292594
swissprot - F1NY54
swissprot - A0A1L1RZS6
swissprot - A0A1L1RJ84
swissprot - A0A1D5P8U0
Ensembl - ENSGALG00000002144
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thrap3aENSDARG00000101989Danio rerio
 thrap3bENSDARG00000098228Danio rerio
 Q9Y2W1ENSG00000054118Homo sapiens
 Q569Z6ENSMUSG00000043962Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BCLAF1 / BCL2 associated transcription factor 1 / Q8K019* / Q9NYF8*ENSGALG0000001393538
BCLAF3 / BCLAF1 and THRAP3 family member 3 / A2AG58* / A2AJT9*ENSGALG0000001641816


Protein motifs (from Interpro)
Interpro ID Name
 IPR026667  Thyroid hormone receptor-associated protein 3
 IPR029199  THRAP3/BCLAF1 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome IEA
 biological_processGO:0000956 nuclear-transcribed mRNA catabolic process IEA
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter IEA
 biological_processGO:0007623 circadian rhythm IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0030518 intracellular steroid hormone receptor signaling pathway IEA
 biological_processGO:0030521 androgen receptor signaling pathway IEA
 biological_processGO:0042753 positive regulation of circadian rhythm IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048026 positive regulation of mRNA splicing, via spliceosome IEA
 biological_processGO:0048255 mRNA stabilization IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016592 mediator complex IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0035145 exon-exon junction complex IEA
 molecular_functionGO:0001046 core promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003712 transcription coregulator activity IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0046966 thyroid hormone receptor binding IEA
 molecular_functionGO:0051219 phosphoprotein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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