ENSGALG00000002286


Gallus gallus

Features
Gene ID: ENSGALG00000002286
  
Biological name :H3F3B
  
Synonyms : H3F3B / Histone H3.3 / P84247
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 18
Strand: 1
Band:
Gene start: 4763340
Gene end: 4765084
  
Corresponding Affymetrix probe sets: Gga.12912.1.S1_at (Chicken Array)   Gga.4770.1.S1_at (Chicken Array)   Gga.5274.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000040771
Ensembl peptide - ENSGALP00000064683
Ensembl peptide - ENSGALP00000063843
Ensembl peptide - ENSGALP00000058648
Ensembl peptide - ENSGALP00000003584
NCBI entrez gene - 396233     See in Manteia.
RefSeq - NM_205296
RefSeq Peptide - NP_990627
swissprot - A0A1L1S0L7
swissprot - A0A1L1RIS6
swissprot - A0A1I7Q449
swissprot - P84247
Ensembl - ENSGALG00000002286
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
H3F3C / histone H3.2 / H3.Y* / H3F3B* / H3F3A* / Q6NXT2* / P84243* / P84244* / Histone H3.3 * / H3 histone family member 3B* / H3 histone family member 3A* / H3 histone family member 3C* /...ENSGALG0000002007865
P84229 / HIST1H3H / Histone H3.2 ENSGALG0000002706464
P84229 / Histone H3.2 / P84228* / Hist2h3c2*ENSGALG0000003042464
P84229 / Histone H3.2 / P84228* / Hist1h3d* / Hist1h3f*ENSGALG0000003524464
P84229 / Histone H3.2 ENSGALG0000003793064
P84229 / HIST2H3L / Histone H3.2 / Q71DI3* / P84228* / HIST2H3A* / Hist2h3b* / histone cluster 2 H3 family member a*ENSGALG0000003896964
P84229 / Histone H3.2 / P84228* / Hist2h3c1*ENSGALG0000004000464
P84229 / Histone H3.2 ENSGALG0000004030364
P84229 / HIST2H3D / Histone H3.2 / Q71DI3* / histone cluster 2 H3 family member d*ENSGALG0000004306264


Protein motifs (from Interpro)
Interpro ID Name
 IPR000164  Histone H3/CENP-A
 IPR007125  Histone H2A/H2B/H3
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IBA
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0031492 nucleosomal DNA binding IBA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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