ENSGALG00000002487


Gallus gallus

Features
Gene ID: ENSGALG00000002487
  
Biological name :SFSWAP
  
Synonyms : SFSWAP / splicing factor SWAP
  
Possible biological names infered from orthology : Q12872 / Q3USH5 / Splicing factor, suppressor of white-apricot homolog
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 2791350
Gene end: 2832002
  
Corresponding Affymetrix probe sets: GgaAffx.25510.1.S1_at (Chicken Array)   GgaAffx.25510.2.S1_s_at (Chicken Array)   GgaAffx.25510.3.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053571
Ensembl peptide - ENSGALP00000003909
NCBI entrez gene - 416802     See in Manteia.
RefSeq - XM_415093
RefSeq - XM_015275635
RefSeq - XM_015275636
RefSeq - XM_004945518
RefSeq - XM_015275634
swissprot - F1P586
swissprot - A0A1D5PL57
Ensembl - ENSGALG00000002487
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sfswapENSDARG00000005980Danio rerio
 Q12872ENSG00000061936Homo sapiens
 Q3USH5ENSMUSG00000029439Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000061  SWAP/Surp
 IPR019147  Suppressor of white apricot N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000380 alternative mRNA splicing, via spliceosome IEA
 biological_processGO:0000395 mRNA 5"-splice site recognition IEA
 biological_processGO:0006396 RNA processing IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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