ENSGALG00000002929


Gallus gallus

Features
Gene ID: ENSGALG00000002929
  
Biological name :TRIP12
  
Synonyms : thyroid hormone receptor interactor 12 / TRIP12
  
Possible biological names infered from orthology : G5E870 / Q14669
  
Species: Gallus gallus
  
Chr. number: 9
Strand: -1
Band:
Gene start: 10054638
Gene end: 10117917
  
Corresponding Affymetrix probe sets: Gga.10821.1.S1_at (Chicken Array)   Gga.10821.2.S1_s_at (Chicken Array)   Gga.17645.1.S1_at (Chicken Array)   Gga.17645.1.S1_s_at (Chicken Array)   GgaAffx.25685.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000004614
Ensembl peptide - ENSGALP00000054718
Ensembl peptide - ENSGALP00000051483
Ensembl peptide - ENSGALP00000050394
NCBI entrez gene - 424785     See in Manteia.
RefSeq - XM_015276972
RefSeq - XM_015276968
RefSeq - XM_015276969
RefSeq - XM_015276970
RefSeq - XM_015276971
RefSeq - XM_004937064
RefSeq - XM_004937065
RefSeq - XM_015276964
RefSeq - XM_015276965
RefSeq - XM_015276966
RefSeq - XM_015276967
swissprot - E1BZV7
swissprot - A0A1D5PPB9
swissprot - A0A1D5PFC0
swissprot - A0A1D5PCA7
Ensembl - ENSGALG00000002929
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 F1RCR6ENSDARG00000061397Danio rerio
 Q14669ENSG00000153827Homo sapiens
 G5E870ENSMUSG00000026219Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HECTD1 / HECT domain E3 ubiquitin protein ligase 1 / Q69ZR2* / Q9ULT8* / E3 ubiquitin-protein ligase HECTD1 *ENSGALG0000000994617


Protein motifs (from Interpro)
Interpro ID Name
 IPR000569  HECT domain
 IPR004170  WWE domain
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR018123  WWE domain, subgroup


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0045995 regulation of embryonic development IEA
 biological_processGO:1901315 negative regulation of histone H2A K63-linked ubiquitination IEA
 biological_processGO:2000780 negative regulation of double-strand break repair IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046966 thyroid hormone receptor binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr