ENSGALG00000003208


Gallus gallus

Features
Gene ID: ENSGALG00000003208
  
Biological name :GABARAPL2
  
Synonyms : GABARAPL2 / GABA type A receptor associated protein like 2
  
Possible biological names infered from orthology : Gamma-aminobutyric acid receptor-associated protein-like 2 / P60520 / P60521
  
Species: Gallus gallus
  
Chr. number: 11
Strand: -1
Band:
Gene start: 20146841
Gene end: 20155084
  
Corresponding Affymetrix probe sets: Gga.7325.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005074
NCBI entrez gene - 770240     See in Manteia.
RefSeq - XM_001232688
swissprot - F1NNM2
Ensembl - ENSGALG00000003208
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gabarapl2ENSDARG00000027200Danio rerio
 P60520ENSG00000034713Homo sapiens
 P60521ENSMUSG00000031950Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GABARAPL1 / GABA type A receptor associated protein like 1 / Q8R3R8* / Q9H0R8* / Gamma-aminobutyric acid receptor-associated protein-like 1 *ENSGALG0000001472361
MAP1LC3C / microtubule associated protein 1 light chain 3 gamma / Q9BXW4*ENSGALG0000001074142
MAP1LC3B / A6NCE7* / Q9CQV6* / Q9GZQ8* / MAP1LC3B2* / microtubule associated protein 1 light chain 3 beta* / microtubule associated protein 1 light chain 3 beta 2* / Microtubule-associated ...ENSGALG0000004310539
Q91VR7* / Q9H492* / MAP1LC3A* / microtubule associated protein 1 light chain 3 alpha* / Microtubule-associated proteins 1A/1B light chain 3A *ENSGALG0000003872138


Protein motifs (from Interpro)
Interpro ID Name
 IPR004241  Autophagy protein Atg8 ubiquitin-like
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IBA
 biological_processGO:0000422 autophagy of mitochondrion IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0006995 cellular response to nitrogen starvation IBA
 biological_processGO:1901799 negative regulation of proteasomal protein catabolic process IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0000421 autophagosome membrane IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005776 autophagosome IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IBA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA


Pathways (from Reactome)
Pathway description
Macroautophagy
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr