ENSGALG00000003851


Gallus gallus

Features
Gene ID: ENSGALG00000003851
  
Biological name :TRIT1
  
Synonyms : TRIT1 / tRNA isopentenyltransferase 1
  
Possible biological names infered from orthology : Q80UN9 / Q9H3H1
  
Species: Gallus gallus
  
Chr. number: 23
Strand: -1
Band:
Gene start: 5531405
Gene end: 5545370
  
Corresponding Affymetrix probe sets: Gga.7295.1.S1_at (Chicken Array)   GgaAffx.26025.1.S1_at (Chicken Array)   GgaAffx.26025.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006110
Ensembl peptide - ENSGALP00000057485
Ensembl peptide - ENSGALP00000048763
NCBI entrez gene - 419678     See in Manteia.
RefSeq - XM_004947886
swissprot - E1C6R1
swissprot - A0A1D5PWZ5
swissprot - A0A1D5P7S1
Ensembl - ENSGALG00000003851
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trit1ENSDARG00000032876Danio rerio
 TRIT1ENSG00000043514Homo sapiens
 Trit1ENSMUSG00000028653Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR018022  IPP transferase
 IPR022755  Zinc finger, double-stranded RNA binding
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030666  tRNA isopentenyltransferase, eukaryotes


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006400 tRNA modification IBA
 biological_processGO:0008033 tRNA processing IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0052381 tRNA dimethylallyltransferase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr