ENSGALG00000004441


Gallus gallus

Features
Gene ID: ENSGALG00000004441
  
Biological name :CPSF4L
  
Synonyms : cleavage and polyadenylation specific factor 4 like / CPSF4L
  
Possible biological names infered from orthology : A6NMK7
  
Species: Gallus gallus
  
Chr. number: 18
Strand: -1
Band:
Gene start: 9090618
Gene end: 9103064
  
Corresponding Affymetrix probe sets: GgaAffx.26212.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007054
NCBI entrez gene - 771558     See in Manteia.
RefSeq - XM_001234821
RefSeq - XM_015279937
swissprot - E1BVA5
Ensembl - ENSGALG00000004441
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A6NMK7ENSG00000187959Homo sapiens
 Cpsf4lENSMUSG00000018727Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CPSF4 / cleavage and polyadenylation specific factor 4 / O95639* / Q8BQZ5* / Cleavage and polyadenylation specificity factor subunit 4 *ENSGALG0000000471439
ZC3H3 / zinc finger CCCH domain-containing protein 3 / Q8CHP0* / Q8IXZ2* / zinc finger CCCH-type containing 3*ENSGALG0000004326514


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR001878  Zinc finger, CCHC-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006378 mRNA polyadenylation IBA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 biological_processGO:0098789 pre-mRNA cleavage required for polyadenylation IBA
 cellular_componentGO:0005847 mRNA cleavage and polyadenylation specificity factor complex IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0004521 endoribonuclease activity IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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