ENSGALG00000005160


Gallus gallus

Features
Gene ID: ENSGALG00000005160
  
Biological name :VMP1
  
Synonyms : vacuole membrane protein 1 / VMP1
  
Possible biological names infered from orthology : Q96GC9 / Q99KU0
  
Species: Gallus gallus
  
Chr. number: 19
Strand: 1
Band:
Gene start: 7319453
Gene end: 7375427
  
Corresponding Affymetrix probe sets: Gga.13926.1.S1_at (Chicken Array)   Gga.1722.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008272
NCBI entrez gene - 417635     See in Manteia.
RefSeq - XM_004946715
RefSeq - XM_004946716
RefSeq - XM_015296139
RefSeq - XM_415880
RefSeq - XM_004946714
swissprot - E1BWQ3
Ensembl - ENSGALG00000005160
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vmp1ENSDARG00000012450Danio rerio
 VMP1ENSG00000062716Homo sapiens
 Vmp1ENSMUSG00000018171Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR032816  SNARE associated Golgi protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006887 exocytosis IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0007029 endoplasmic reticulum organization IBA
 biological_processGO:0007030 Golgi organization IBA
 biological_processGO:0007566 embryo implantation IEA
 biological_processGO:0034329 cell junction assembly IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 cellular_componentGO:0000407 phagophore assembly site IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IBA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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