ENSGALG00000005352


Gallus gallus

Features
Gene ID: ENSGALG00000005352
  
Biological name :GATA5
  
Synonyms : GATA5 / transcription factor GATA-5
  
Possible biological names infered from orthology : GATA binding protein 5 / P97489 / Q9BWX5
  
Species: Gallus gallus
  
Chr. number: 20
Strand: -1
Band:
Gene start: 8211124
Gene end: 8221460
  
Corresponding Affymetrix probe sets: Gga.2081.1.S1_at (Chicken Array)   Gga.2081.1.S2_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008569
Ensembl peptide - ENSGALP00000061801
Ensembl peptide - ENSGALP00000060387
Ensembl peptide - ENSGALP00000057464
NCBI entrez gene - 396391     See in Manteia.
RefSeq - XM_015296343
RefSeq - NM_205421
RefSeq - XM_015296342
RefSeq Peptide - NP_990752
swissprot - F1NZV5
swissprot - A0A1L1RSL8
swissprot - A0A1L1RNM9
swissprot - A0A1D5PWX5
Ensembl - ENSGALG00000005352
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gata5ENSDARG00000017821Danio rerio
 GATA5ENSG00000130700Homo sapiens
 Gata5ENSMUSG00000015627Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GATA6 / transcription factor GATA-6 / Q61169* / Q92908* / GATA binding protein 6*ENSGALG0000001497652
GATA4 / GATA binding protein 4 / P43694* / Q08369* / Transcription factor GATA-4 *ENSGALG0000001666252
GATA2 / P23824 / GATA-binding factor 2 / O09100* / P23769* / GATA binding protein 2* / Mus musculus GATA binding protein 2 (Gata2), transcript variant 2, mRNA.*ENSGALG0000000590936
GATA3 / P23825 / GATA-binding factor 3 / P23771* / P23772* / GATA binding protein 3* / Mus musculus GATA binding protein 3 (Gata3), transcript variant 3, mRNA.*ENSGALG0000002927034
TRPS1 / transcriptional repressor GATA binding 1 / Q9UHF7*ENSGALG0000003170023


Protein motifs (from Interpro)
Interpro ID Name
 IPR000679  Zinc finger, GATA-type
 IPR008013  GATA-type transcription activator, N-terminal
 IPR013088  Zinc finger, NHR/GATA-type
 IPR016375  Transcription factor GATA-4/5/6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0060575 intestinal epithelial cell differentiation IEA
 biological_processGO:0071773 cellular response to BMP stimulus IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0001158 enhancer sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003705 transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Factors involved in megakaryocyte development and platelet production


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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