ENSGALG00000005458


Gallus gallus
ribosomalRPL3Lproteinsubunitltranslationlargeribosomesnonsensemediateddecaynmdexonjunctioncomplexejcbeta-barreldomainsuperfamilyconservedsiteassemblyintracellularcytosolicrnabindingstructuralconstituentsrp-dependentcotranslational

Features
Gene ID: ENSGALG00000005458
  
Biological name :RPL3L
  
Synonyms : 60S ribosomal protein L3-like / RPL3L
  
Possible biological names infered from orthology : Q92901 / ribosomal protein L3 like
  
Species: Gallus gallus
  
Chr. number: 14
Strand: -1
Band:
Gene start: 6168865
Gene end: 6176221
  
Corresponding Affymetrix probe sets: Gga.11382.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000054439
Ensembl peptide - ENSGALP00000008744
NCBI entrez gene - 416542     See in Manteia.
RefSeq - XM_015294203
RefSeq - NM_001277559
RefSeq - XM_015294202
RefSeq Peptide - NP_001264488
swissprot - F1P5V2
swissprot - A0A1D5PNJ7
Ensembl - ENSGALG00000005458
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPL3LENSG00000140986Homo sapiens
 Rpl3lENSMUSG00000002500Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RPL3 / ribosomal protein L3 / P27659* / P39023* / 60S ribosomal protein L3 *ENSGALG0000001217269


Protein motifs (from Interpro)
Interpro ID Name
 IPR000597  Ribosomal protein L3
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR019926  Ribosomal protein L3, conserved site


Gene Ontology (GO)
cellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component ocellular component organizationcellular component bcellular component biogenesisnitrogen compound menitrogen compound metabolic processbiosynthetic processbiosynthetic processcellular metabolic pcellular metabolic processprimary metabolic prprimary metabolic processorganic substance meorganic substance metabolic process
organic cyclic compound bindingheterocyclic compound bindingstructural constituent of ribosomeorganic cyclic compound bindingheterocyclic compound bindingstructural constituent of ribosomeorganic cyclic compound bindingheterocyclic compound bindingstructural constituent of ribosomeorganic cyclic compound bindingheterocyclic compound bindingstructural constituent of ribosomeorganic cyclic compound bindingheterocyclic compound bindingstructural constituent of ribosomeorganic cyclic compound bindingheterocyclic compound bindingstructural constituent of ribosomeorganic cyclic compound bindingheterocyclic compound bindingstructural constituent of ribosomeorganic cyclic compound bindingheterocyclic compound bindingstructural constituent of ribosomeorganic cyclic compound bindingheterocyclic compound bindingstructural constituent of ribosomeorganic cyclic compound bindingheterocyclic compound bindingstructural constituent of ribosomeorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound bindingstructural constituent of ribosomestructural constituent of ribosome
cellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellcellprotein-containing complexprotein-containing complexorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IBA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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