ENSGALG00000005643


Gallus gallus

Features
Gene ID: ENSGALG00000005643
  
Biological name :LYVE1
  
Synonyms : lymphatic vessel endothelial hyaluronan receptor 1 / LYVE1
  
Possible biological names infered from orthology : Lymphatic vessel endothelial hyaluronic acid receptor 1 / Q8BHC0 / Q9Y5Y7
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 8890833
Gene end: 8901438
  
Corresponding Affymetrix probe sets: Gga.12186.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009036
NCBI entrez gene - 423038     See in Manteia.
RefSeq - NM_001199587
RefSeq - XM_015286374
RefSeq Peptide - NP_001186516
swissprot - E1C9I1
Ensembl - ENSGALG00000005643
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lyve1bENSDARG00000062483Danio rerio
 LYVE1ENSG00000133800Homo sapiens
 Lyve1ENSMUSG00000030787Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CD44 / CD44 molecule (Indian blood group) / P16070*ENSGALG0000003908020


Protein motifs (from Interpro)
Interpro ID Name
 IPR000538  Link domain
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006027 glycosaminoglycan catabolic process IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007165 signal transduction IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0071944 cell periphery IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity IEA
 molecular_functionGO:0005540 hyaluronic acid binding IEA


Pathways (from Reactome)
Pathway description
Hyaluronan uptake and degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000002138 HYAL2 / hyaluronoglucosaminidase 2 / O35632* / Q12891* / Hyaluronidase-2 *  / complex / reaction
 ENSGALG00000008569 CHP1 / Q5ZM44 / Calcineurin B homologous protein 1 / P61022* / Q99653* / calcineurin like EF-hand protein 1*  / complex / reaction






 

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