ENSGALG00000006120


Gallus gallus

Features
Gene ID: ENSGALG00000006120
  
Biological name :PKD2L2
  
Synonyms : PKD2L2 / polycystin 2 like 2, transient receptor potential cation channel
  
Possible biological names infered from orthology : Polycystic kidney disease 2-like 2 protein / Q9JLG4 / Q9NZM6
  
Species: Gallus gallus
  
Chr. number: 13
Strand: -1
Band:
Gene start: 14423184
Gene end: 14430276
  
Corresponding Affymetrix probe sets: GgaAffx.8670.1.S1_at (Chicken Array)   GgaAffx.8670.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009861
swissprot - F1NE51
Ensembl - ENSGALG00000006120
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PKD2L2ENSG00000078795Homo sapiens
 Pkd2l2ENSMUSG00000014503Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PKD2L1 / polycystin 2 like 1, transient receptor potential cation channel / A2A259* / Q9P0L9* / Polycystic kidney disease 2-like 1 protein *ENSGALG0000000576653
PKD2 / polycystin-2 / O35245* / Q13563* / polycystin 2, transient receptor potential cation channel*ENSGALG0000001092150
Pkd1l2*ENSGALG0000000543529
PKD1 / polycystin 1, transient receptor potential channel interacting / O08852* / P98161* / Polycystin-1 *ENSGALG0000000571421
PKDREJ* / Q9NTG1* / polycystin family receptor for egg jelly*ENSGALG000000391331


Protein motifs (from Interpro)
Interpro ID Name
 IPR003915  Polycystic kidney disease type 2 protein
 IPR013122  Polycystin cation channel, PKD1/PKD2
 IPR027359  Voltage-dependent channel domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050982 detection of mechanical stimulus IBA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0016020 membrane IBA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005262 calcium channel activity IBA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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