ENSGALG00000006572


Gallus gallus

Features
Gene ID: ENSGALG00000006572
  
Biological name :TNNT3
  
Synonyms : P12620 / TNNT3 / Troponin T, fast skeletal muscle isoforms
  
Possible biological names infered from orthology : P45378 / troponin T3, fast skeletal type / troponin T3, skeletal, fast
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 14010254
Gene end: 14044529
  
Corresponding Affymetrix probe sets: Gga.4090.1.S1_a_at (Chicken Array)   Gga.4090.6.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052047
Ensembl peptide - ENSGALP00000063676
Ensembl peptide - ENSGALP00000061928
Ensembl peptide - ENSGALP00000010605
Ensembl peptide - ENSGALP00000010606
NCBI entrez gene - 395761     See in Manteia.
RefSeq - XM_015286576
RefSeq - XM_015286570
RefSeq - XM_015286571
RefSeq - XM_015286572
RefSeq - XM_015286573
RefSeq - XM_015286574
RefSeq - XM_015286575
RefSeq - NM_204922
RefSeq - XM_015286531
RefSeq - XM_015286532
RefSeq - XM_015286533
RefSeq - XM_015286534
RefSeq - XM_015286535
RefSeq - XM_015286537
RefSeq - XM_015286538
RefSeq - XM_015286539
RefSeq - XM_015286540
RefSeq - XM_015286541
RefSeq - XM_015286542
RefSeq - XM_015286543
RefSeq - XM_015286544
RefSeq - XM_015286545
RefSeq - XM_015286546
RefSeq - XM_015286548
RefSeq - XM_015286549
RefSeq - XM_015286550
RefSeq - XM_015286551
RefSeq - XM_015286552
RefSeq - XM_015286553
RefSeq - XM_015286554
RefSeq - XM_015286555
RefSeq - XM_015286556
RefSeq - XM_015286557
RefSeq - XM_015286559
RefSeq - XM_015286560
RefSeq - XM_015286561
RefSeq - XM_015286562
RefSeq - XM_015286563
RefSeq - XM_015286564
RefSeq - XM_015286565
RefSeq - XM_015286566
RefSeq - XM_015286567
RefSeq - XM_015286568
RefSeq Peptide - NP_990253
swissprot - A0A1L1RXW8
swissprot - A0A1D5PGX1
swissprot - A0A0A0MQ44
swissprot - O57559
swissprot - P12620
Ensembl - ENSGALG00000006572
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tnnt3aENSDARG00000030270Danio rerio
 tnnt3bENSDARG00000068457Danio rerio
 TNNT3ENSG00000130595Homo sapiens
 Tnnt3ENSMUSG00000061723Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TNNT2 / troponin T, cardiac muscle isoforms / P50752* / P45379* / troponin T2, cardiac type* / Troponin T, cardiac muscle *ENSGALG0000000030248


Protein motifs (from Interpro)
Interpro ID Name
 IPR001978  Troponin
 IPR027707  Troponin T
 IPR027708  Troponin T, fast skeletal muscle


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003009 skeletal muscle contraction IEA
 biological_processGO:0006937 regulation of muscle contraction IEA
 biological_processGO:0006942 regulation of striated muscle contraction IEA
 biological_processGO:0043462 regulation of ATPase activity IEA
 cellular_componentGO:0005861 troponin complex IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005523 tropomyosin binding IEA
 molecular_functionGO:0030172 troponin C binding IEA
 molecular_functionGO:0030899 calcium-dependent ATPase activity IEA
 molecular_functionGO:0031013 troponin I binding IEA
 molecular_functionGO:0048306 calcium-dependent protein binding IEA


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000001459 TNNC1 / P09860 / Troponin C, slow skeletal and cardiac muscles / P63316* / P19123* / troponin C1, slow skeletal and cardiac type*  / complex
 ENSGALG00000006835 TNNC2 / P02588 / Troponin C, skeletal muscle / P20801* / P02585* / troponin C2, fast skeletal type*  / complex






 

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contact: otassy@igbmc.fr