ENSGALG00000006934


Gallus gallus

Features
Gene ID: ENSGALG00000006934
  
Biological name :PATZ1
  
Synonyms : PATZ1 / POZ/BTB and AT hook containing zinc finger 1
  
Possible biological names infered from orthology : POZ-, AT hook-, and zinc finger-containing protein 1 isoform 3 / Q9HBE1
  
Species: Gallus gallus
  
Chr. number: 15
Strand: 1
Band:
Gene start: 9060800
Gene end: 9078033
  
Corresponding Affymetrix probe sets: Gga.15948.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011217
Ensembl peptide - ENSGALP00000056719
Ensembl peptide - ENSGALP00000054212
NCBI entrez gene - 416963     See in Manteia.
RefSeq - XM_004934376
RefSeq - XM_004934372
RefSeq - XM_004934373
RefSeq - XM_004934374
RefSeq - XM_001232641
RefSeq - XM_004934371
swissprot - A0A1D5PUW1
swissprot - A0A1D5PMX5
swissprot - E1C1B9
Ensembl - ENSGALG00000006934
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 patz1ENSDARG00000076584Danio rerio
 PATZ1ENSG00000100105Homo sapiens
 Patz1ENSMUSG00000020453Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
VEZF1 / vascular endothelial zinc finger 1 / Q14119*ENSGALG0000000553020


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0008584 male gonad development IEA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0030217 T cell differentiation IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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