ENSGALG00000006968


Gallus gallus

Features
Gene ID: ENSGALG00000006968
  
Biological name :HNF1A
  
Synonyms : HNF1A / HNF1 homeobox A
  
Possible biological names infered from orthology : Hepatocyte nuclear factor 1-alpha / P20823 / P22361
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 9150582
Gene end: 9164971
  
Corresponding Affymetrix probe sets: GgaAffx.4357.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000037563
Ensembl peptide - ENSGALP00000060662
NCBI entrez gene - 416967     See in Manteia.
RefSeq - NM_001030668
RefSeq Peptide - NP_001025839
swissprot - E1BQ64
swissprot - A0A1L1RPG1
Ensembl - ENSGALG00000006968
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HNF1AENSG00000135100Homo sapiens
 Hnf1aENSMUSG00000029556Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HNF1B / HNF1 homeobox B / P27889* / P35680* / Hepatocyte nuclear factor 1-beta *ENSGALG0000000550449
HMBOX1 / homeobox-containing protein 1 / Q6NT76* / Q8BJA3* / homeobox containing 1* / Mus musculus homeobox containing 1 (Hmbox1), transcript variant 3, mRNA.*ENSGALG0000001663312


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR006897  Hepatocyte nuclear factor 1, beta isoform, C-terminal
 IPR006898  Hepatocyte nuclear factor 1, alpha isoform C-terminal
 IPR006899  Hepatocyte nuclear factor 1, N-terminal
 IPR009057  Homeobox-like domain superfamily
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily
 IPR023219  Hepatocyte nuclear factor 1, N-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001824 blastocyst development IEA
 biological_processGO:0001889 liver development IEA
 biological_processGO:0001890 placenta development IEA
 biological_processGO:0006338 chromatin remodeling IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006633 fatty acid biosynthetic process IEA
 biological_processGO:0006699 bile acid biosynthetic process IEA
 biological_processGO:0006783 heme biosynthetic process IEA
 biological_processGO:0006979 response to oxidative stress IEA
 biological_processGO:0008104 protein localization IEA
 biological_processGO:0008203 cholesterol metabolic process IEA
 biological_processGO:0009749 response to glucose IEA
 biological_processGO:0015721 bile acid and bile salt transport IEA
 biological_processGO:0015908 fatty acid transport IEA
 biological_processGO:0016573 histone acetylation IEA
 biological_processGO:0030073 insulin secretion IEA
 biological_processGO:0030111 regulation of Wnt signaling pathway IEA
 biological_processGO:0030326 embryonic limb morphogenesis IEA
 biological_processGO:0031018 endocrine pancreas development IEA
 biological_processGO:0035623 renal glucose absorption IEA
 biological_processGO:0042593 glucose homeostasis IEA
 biological_processGO:0043691 reverse cholesterol transport IEA
 biological_processGO:0045453 bone resorption IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0046323 glucose import IEA
 biological_processGO:0046883 regulation of hormone secretion IEA
 biological_processGO:0048341 paraxial mesoderm formation IEA
 biological_processGO:0048608 reproductive structure development IEA
 biological_processGO:0050796 regulation of insulin secretion IEA
 biological_processGO:0060395 SMAD protein signal transduction IEA
 cellular_componentGO:0001750 photoreceptor outer segment IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0045120 pronucleus IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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