ENSGALG00000007042


Gallus gallus

Features
Gene ID: ENSGALG00000007042
  
Biological name :CCDC40
  
Synonyms : CCDC40 / coiled-coil domain containing 40
  
Possible biological names infered from orthology : Coiled-coil domain-containing protein 40 / Q4G0X9 / Q8BI79
  
Species: Gallus gallus
  
Chr. number: 18
Strand: -1
Band:
Gene start: 9647197
Gene end: 9654965
  
Corresponding Affymetrix probe sets: Gga.7394.1.S1_s_at (Chicken Array)   GgaAffx.20161.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011394
NCBI entrez gene - 422083     See in Manteia.
RefSeq - XM_015295602
swissprot - E1C9D7
Ensembl - ENSGALG00000007042
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ccdc40ENSDARG00000100584Danio rerio
 CCDC40ENSG00000141519Homo sapiens
 Ccdc40ENSMUSG00000039963Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013956  E3 ubiquitin ligase Bre1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001947 heart looping IEA
 biological_processGO:0003341 cilium movement IEA
 biological_processGO:0003351 epithelial cilium movement IEA
 biological_processGO:0003356 regulation of cilium beat frequency IEA
 biological_processGO:0030317 flagellated sperm motility IEA
 biological_processGO:0030324 lung development IEA
 biological_processGO:0035082 axoneme assembly IEA
 biological_processGO:0035469 determination of pancreatic left/right asymmetry IEA
 biological_processGO:0036159 inner dynein arm assembly IEA
 biological_processGO:0044458 motile cilium assembly IEA
 biological_processGO:0060287 epithelial cilium movement involved in determination of left/right asymmetry IEA
 biological_processGO:0070286 axonemal dynein complex assembly IEA
 biological_processGO:0071907 determination of digestive tract left/right asymmetry IEA
 biological_processGO:0071910 determination of liver left/right asymmetry IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0005930 axoneme IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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