ENSGALG00000007217


Gallus gallus

Features
Gene ID: ENSGALG00000007217
  
Biological name :BEST1
  
Synonyms : BEST1 / bestrophin 1
  
Possible biological names infered from orthology : O76090 / O88870
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 16823643
Gene end: 16830832
  
Corresponding Affymetrix probe sets: GgaAffx.4522.1.S1_at (Chicken Array)   GgaAffx.4522.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011669
NCBI entrez gene - 423124     See in Manteia.
RefSeq - XM_004941488
RefSeq - XM_421055
swissprot - E1C3A0
Ensembl - ENSGALG00000007217
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 best1ENSDARG00000078331Danio rerio
 BEST1ENSG00000167995Homo sapiens
 Best1ENSMUSG00000037418Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BEST3 / bestrophin 3 / Q6H1V1* / Q8N1M1*ENSGALG0000001002941
BEST4 / bestrophin 4 / Q8NFU0*ENSGALG0000004360539


Protein motifs (from Interpro)
Interpro ID Name
 IPR000615  Bestrophin
 IPR021134  Bestrophin/UPF0187
 IPR033041  Bestrophin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0030321 transepithelial chloride transport IEA
 biological_processGO:0050908 detection of light stimulus involved in visual perception IEA
 biological_processGO:0051924 regulation of calcium ion transport IEA
 biological_processGO:1902476 chloride transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016323 basolateral plasma membrane IEA
 cellular_componentGO:0034707 chloride channel complex IEA
 molecular_functionGO:0005254 chloride channel activity IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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