ENSGALG00000007299


Gallus gallus

Features
Gene ID: ENSGALG00000007299
  
Biological name :THOC7
  
Synonyms : THOC7 / THO complex 7
  
Possible biological names infered from orthology : Q6I9Y2 / Q7TMY4 / THO complex subunit 7 homolog
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 13545994
Gene end: 13553741
  
Corresponding Affymetrix probe sets: Gga.8986.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000060379
Ensembl peptide - ENSGALP00000011803
NCBI entrez gene - 416077     See in Manteia.
RefSeq - NM_001098238
RefSeq Peptide - NP_001091708
swissprot - F1N915
swissprot - A0A1L1RNN4
Ensembl - ENSGALG00000007299
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thoc7ENSDARG00000015394Danio rerio
 THOC7ENSG00000163634Homo sapiens
 Thoc7ENSMUSG00000053453Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008501  THO complex subunit 7/Mft1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006406 mRNA export from nucleus IEA
 biological_processGO:0046784 viral mRNA export from host cell nucleus IEA
 cellular_componentGO:0000346 transcription export complex IEA
 cellular_componentGO:0000347 THO complex IEA
 cellular_componentGO:0000445 THO complex part of transcription export complex IEA
 cellular_componentGO:0000781 chromosome, telomeric region IBA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016607 nuclear speck IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr