ENSGALG00000007835


Gallus gallus
pseudouridinePUS10synthasesynthesisrnacatalyticdomainsuperfamilymodificationtrnabindingactivity

Features
Gene ID: ENSGALG00000007835
  
Biological name :PUS10
  
Synonyms : pseudouridylate synthase 10 / PUS10
  
Possible biological names infered from orthology : Putative tRNA pseudouridine synthase Pus10 / Q3MIT2 / Q9D3U0
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 2071841
Gene end: 2105903
  
Corresponding Affymetrix probe sets: GgaAffx.4897.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000012703
NCBI entrez gene - 421198     See in Manteia.
RefSeq - NM_001199449
RefSeq - XM_015283299
RefSeq Peptide - NP_001186378
swissprot - E1C8Y6
Ensembl - ENSGALG00000007835
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pus10ENSDARG00000079973Danio rerio
 PUS10ENSG00000162927Homo sapiens
 Pus10ENSMUSG00000020280Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
nitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processnitrogen compound metabolic processcellular metabolic processcellular metabolic processprimary metabolic processprimary metabolic processorganic substance metabolic processorganic substance metabolic process
organic cyclic compound bindingheterocyclic compound bindingisomerase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityorganic cyclic compound bindingheterocyclic compound bindingisomerase activityorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound bindingisomerase activityisomerase activity
TypeGO IDTermEv.Code
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0009451 RNA modification IEA
 biological_processGO:0031119 tRNA pseudouridine synthesis IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0009982 pseudouridine synthase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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