ENSGALG00000008100


Gallus gallus

Features
Gene ID: ENSGALG00000008100
  
Biological name :RAPSN
  
Synonyms : 43 kDa receptor-associated protein of the synapse / RAPSN
  
Possible biological names infered from orthology : P12672 / Q13702 / receptor associated protein of the synapse
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 22862958
Gene end: 22872275
  
Corresponding Affymetrix probe sets: Gga.6394.1.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000060609
Ensembl peptide - ENSGALP00000013132
NCBI entrez gene - 395986     See in Manteia.
RefSeq - XM_015286986
RefSeq - XM_015286983
RefSeq - XM_015286984
RefSeq - XM_015286985
RefSeq - NM_205097
RefSeq - XM_015286981
RefSeq Peptide - NP_990428
swissprot - F1NDR2
swissprot - A0A1L1RPA3
Ensembl - ENSGALG00000008100
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rapsnENSDARG00000041133Danio rerio
 RAPSNENSG00000165917Homo sapiens
 RapsnENSMUSG00000002104Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001237  43kDa postsynaptic protein
 IPR001841  Zinc finger, RING-type
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR018293  43kDa postsynaptic, conserved site
 IPR019568  Rapsyn, myristoylation/linker region, N-terminal
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007268 chemical synaptic transmission IEA
 biological_processGO:0007271 synaptic transmission, cholinergic IEA
 biological_processGO:0043525 positive regulation of neuron apoptotic process IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031594 neuromuscular junction IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0099634 postsynaptic specialization membrane IEA
 molecular_functionGO:0033130 acetylcholine receptor binding IEA
 molecular_functionGO:0043495 protein membrane anchor IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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