ENSGALG00000008561


Gallus gallus

Features
Gene ID: ENSGALG00000008561
  
Biological name :SMNDC1
  
Synonyms : SMNDC1 / survival motor neuron domain containing 1
  
Possible biological names infered from orthology : Mus musculus survival motor neuron domain containing 1 (Smndc1), transcript variant 2, mRNA. / O75940 / Q8BGT7
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 25895854
Gene end: 25903541
  
Corresponding Affymetrix probe sets: GgaAffx.5390.1.S1_at (Chicken Array)   GgaAffx.5390.2.S1_at (Chicken Array)   GgaAffx.5390.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013929
NCBI entrez gene - 423889     See in Manteia.
RefSeq - XM_421753
swissprot - E1BQK7
Ensembl - ENSGALG00000008561
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q7ZV80ENSDARG00000056235Danio rerio
 O75940ENSG00000119953Homo sapiens
 Q8BGT7ENSMUSG00000025024Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002999  Tudor domain
 IPR010304  Survival motor neuron


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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