ENSGALG00000009168


Gallus gallus

Features
Gene ID: ENSGALG00000009168
  
Biological name :AFF2
  
Synonyms : AF4/FMR2 family member 2 / AFF2
  
Possible biological names infered from orthology : O55112 / P51816
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 18260155
Gene end: 18518991
  
Corresponding Affymetrix probe sets: GgaAffx.5791.1.S1_at (Chicken Array)   GgaAffx.5794.1.S1_at (Chicken Array)   GgaAffx.5798.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000014918
NCBI entrez gene - 422394     See in Manteia.
RefSeq - XM_015278653
swissprot - E1BWS6
Ensembl - ENSGALG00000009168
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 aff2ENSDARG00000052242Danio rerio
 AFF2ENSG00000155966Homo sapiens
 Aff2ENSMUSG00000031189Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AFF4 / AF4/FMR2 family member 4 / Q9ESC8* / Q9UHB7*ENSGALG0000003014736
AFF1 / AF4/FMR2 family member 1 / P51825*ENSGALG0000004393530
AFF3* / P51826* / AF4/FMR2 family member 3*ENSGALG0000001676717
AFF3* / P51826* / AF4/FMR2 family member 3*ENSGALG0000003150211


Protein motifs (from Interpro)
Interpro ID Name
 IPR007797  Transcription factor AF4/FMR2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007611 learning or memory IEA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0010629 negative regulation of gene expression IEA
 biological_processGO:0035063 nuclear speck organization IEA
 biological_processGO:0043484 regulation of RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0002151 G-quadruplex RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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