ENSGALG00000009670


Gallus gallus

Features
Gene ID: ENSGALG00000009670
  
Biological name :SGCE
  
Synonyms : sarcoglycan epsilon / SGCE
  
Possible biological names infered from orthology : Epsilon-sarcoglycan / O43556 / O70258
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 23679323
Gene end: 23705714
  
Corresponding Affymetrix probe sets: Gga.11237.1.A1_at (Chicken Array)   Gga.11237.1.S1_at (Chicken Array)   Gga.12924.1.S1_at (Chicken Array)   Gga.13449.1.S1_at (Chicken Array)   Gga.13449.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015724
NCBI entrez gene - 420567     See in Manteia.
RefSeq - XM_004939301
RefSeq - XM_004939302
RefSeq - XM_004939304
RefSeq - XM_015281929
RefSeq - XM_015281930
RefSeq - XM_015281931
RefSeq - XM_015281932
RefSeq - XM_015281933
RefSeq - XM_418667
RefSeq - XM_003640683
swissprot - F1NZ66
Ensembl - ENSGALG00000009670
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgceENSDARG00000012138Danio rerio
 SGCEENSG00000127990Homo sapiens
 SgceENSMUSG00000004631Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006644  Dystroglycan-type cadherin-like
 IPR008908  Sarcoglycan alpha/epsilon
 IPR030775  Epsilon-sarcoglycan


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003012 muscle system process IBA
 biological_processGO:0061024 membrane organization IBA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016010 dystrophin-associated glycoprotein complex IEA
 cellular_componentGO:0016012 sarcoglycan complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032590 dendrite membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr