ENSGALG00000009826


Gallus gallus

Features
Gene ID: ENSGALG00000009826
  
Biological name :CLGN
  
Synonyms : calmegin / CLGN
  
Possible biological names infered from orthology : Mus musculus calmegin (Clgn), transcript variant 2, mRNA. / O14967 / P52194
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 29873452
Gene end: 29888948
  
Corresponding Affymetrix probe sets: Gga.2708.1.S1_at (Chicken Array)   GgaAffx.6163.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015961
NCBI entrez gene - 422447     See in Manteia.
RefSeq - XM_004940942
RefSeq - XM_004940943
RefSeq - XM_004940944
RefSeq - XM_004940945
RefSeq - XM_004940941
swissprot - F1NPD5
Ensembl - ENSGALG00000009826
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clgnENSDARG00000009315Danio rerio
 CLGNENSG00000153132Homo sapiens
 ClgnENSMUSG00000002190Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CANX / calnexin / P27824* / P35564*ENSGALG0000003214855
CALR3 / calreticulin 3 / Q96L12* / Q9D9Q6*ENSGALG0000000391422
CALR / calreticulin / P14211* / P27797*ENSGALG0000004036819


Protein motifs (from Interpro)
Interpro ID Name
 IPR001580  Calreticulin/calnexin
 IPR009033  Calreticulin/calnexin, P domain superfamily
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR018124  Calreticulin/calnexin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006457 protein folding IEA
 biological_processGO:0007338 single fertilization IEA
 biological_processGO:0007339 binding of sperm to zona pellucida IEA
 cellular_componentGO:0005635 nuclear envelope IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0044183 protein binding involved in protein folding IEA
 molecular_functionGO:0051082 unfolded protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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