ENSGALG00000009959


Gallus gallus

Features
Gene ID: ENSGALG00000009959
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : AC025263.2 / Q68EF0 / Q96QF0 / RAB3A interacting protein / RAB3IP
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 35565047
Gene end: 35594362
  
Corresponding Affymetrix probe sets: GgaAffx.23085.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016168
Ensembl peptide - ENSGALP00000048456
Ensembl peptide - ENSGALP00000044475
NCBI entrez gene - 417850     See in Manteia.
RefSeq - XM_015282894
RefSeq - XM_015282903
RefSeq - XM_015282909
RefSeq - XM_416092
swissprot - A0A1D5P6X5
swissprot - A0A1D5NVU6
swissprot - E1C029
Ensembl - ENSGALG00000009959
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab3ipENSDARG00000101908Danio rerio
 AC025263.2ENSG00000258052Homo sapiens
 Q96QF0ENSG00000127328Homo sapiens
 Q68EF0ENSMUSG00000064181Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAB3IL1 / Q8TBN0* / Q8VDV3* / RAB3A interacting protein like 1* / Mus musculus RAB3A interacting protein (rabin3)-like 1 (Rab3il1), transcript variant 2, mRNA.*ENSGALG0000000720346


Protein motifs (from Interpro)
Interpro ID Name
 IPR009449  GDP/GTP exchange factor Sec2, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Anchoring of the basal body to the plasma membrane
VxPx cargo-targeting to cilium
BBSome-mediated cargo-targeting to cilium
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000008195 NPHP1 / nephrocystin 1 / O15259* / nephronophthisis 1 (juvenile) homolog (human)*  / complex / reaction
 ENSGALG00000005714 PKD1 / polycystin 1, transient receptor potential channel interacting / O08852* / P98161* / Polycystin-1 *  / complex / reaction
 ENSGALG00000007615 Q5ZJN2 / RAB11A / Ras-related protein Rab-11A / P62491* / P62492* / RAB11A, member RAS oncogene family*  / complex / reaction
 ENSGALG00000028851 RAB8A / Q5F470 / Ras-related protein Rab-8A / P61006* / P55258* / RAB8A, member RAS oncogene family*  / complex / reaction
 ENSGALG00000037618 ASAP1 / ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 / Q9QWY8* / Q9ULH1* / Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 *  / complex / reaction






 

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